Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06780 ATGGCTGTTGAAGATGATCCCATGGTGGTTCCCAACCTCTCTCCACCCAATACCTACGAAGCTGTTGTCAATGGTGGCACCTTTGACCGATTGCATGACGGTCACCGCCTCTTTCTTACGGCTTCTGCTCAGTTGGCAAACAACCGTCTTGTGATTGGAGTTTGCGATGGTCCTATGCTTGTAAACAAACAGTTTGCTGAACTCATACAACCAATTGAGACGAGGATACAGAATGTCAAAACTTTCATAAAGTCTATTAAGCCAGAGTTGGAAGTGCAAGCTGTACCAATTACAGATCCATATGGCCCTTCCATTGTAGATGAAAAATTGGAAGCTGTGATTGTGAGCAAAGAGACTTTACCTGGTGGGTTGGCTGTGAACAGAAAAAGAGCTGAGAGAGGCCTTTCACAGTTGAAGATTGAAGTTGTAGATTTGGTCTCTGGAGATTCAGGTGAGACTAAGCTGAGTTCATCAATGTTGCGAAAGCTTGAGGTTGAAAATGCCCAAAAACAAAGTTCAATACCACGGACAGAGTAG 537 0.4413 MAVEDDPMVVPNLSPPNTYEAVVNGGTFDRLHDGHRLFLTASAQLANNRLVIGVCDGPMLVNKQFAELIQPIETRIQNVKTFIKSIKPELEVQAVPITDPYGPSIVDEKLEAVIVSKETLPGGLAVNRKRAERGLSQLKIEVVDLVSGDSGETKLSSSMLRKLEVENAQKQSSIPRTE 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06780 178 NCBIfam cytidyltransferase-like domain 22 86 IPR004821 GO:0003824|GO:0009058
Vifa1g06780 178 PANTHER DEPHOSPHO-COA KINASE-RELATED 37 170 - -
Vifa1g06780 178 FunFam Bifunctional coenzyme A synthase 21 167 - -
Vifa1g06780 178 Gene3D HUPs 21 171 IPR014729 -
Vifa1g06780 178 CDD PPAT_CoAS 22 162 - -
Vifa1g06780 178 SUPERFAMILY Nucleotidylyl transferase 22 168 - -
Vifa1g06780 178 Pfam Cytidylyltransferase-like 25 161 IPR004821 GO:0003824|GO:0009058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06780 K02201 K02318 gmx:100798626 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06780 1 1046665017 1046667263 Vifa1g06780 1 1046665017 1046667263 ECH