Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06776 ATGGCACAGAAGAGCAAAATCCTAGTCCTAGGAGGAACAGGTTACATAGGAAAATTCATAGTTGAGGCAAGTGCAAAAGCAGGACACCCCACGTTTGCTTTAGTTAGAGAAAGCACAGTTTCTCATCCTGAAAAATCTAAGCTTATTGACAGTTTCAAAAGCTCTGGAGTTACTTTGGTCTATGGTGATCTAGCTGATCATGAAAGTCTTGTTAAGGCGGTTAAGCAAGTTGATGTTGTTATTTCTACACTTGGAGGAGGACAAATAAGTGATCAAGTTAAGCTCATAGCTGCCATAAAAGAAGCCGGAAACATCAAGAGGTTTCTCCCATCTGAATTTGGGATGGACGTTGATCGTCACCACGCCGTTGAGCCTGTAACCAGCTTCTTTAACCAAAAAGTGAAAATCCGAAGAGCCGTTGAAACTTCCGGAATTCCTTACACTTACATCAGCTCGAACGCCTTTGCCGGATACTTCCTCCCAACATTAGCACAACAAAATGTCACTGCTCCTCCCAGAGACAAAGTGATCATTCTTGGAGACGGAAACGTCCCAGCAATATATGTGAAGGAGGAAGACATTGGAACTTTTACTATTAAAACAGTGGACGATCCAAGAACTTTGAACAAAACTGTATACTTTAGGCCTCGTGGCAACGTTGTGACTTTCAACGAACTTGTCTCCATTTGGGAGAATAAGATTAAGAGTACCCTTCAGAAAATCTATCTTCCAGAAGATCAAATTCTTAAGACTATTCAAGAATCTCCCTTCCCTGCAAATTTGATGTTGGCTTTAGGTCATTCGATGCTAGTAAAGGGTGATGCTGCAAATTTTGAGATTGAATCTTCTTTTGGAGTGGAAGTTACTGAGCTTTACCCTGAGGTGAAATATACTACTGTCGACGAGTATTTGAATGCATTCGTTTGA 927 0.411 MAQKSKILVLGGTGYIGKFIVEASAKAGHPTFALVRESTVSHPEKSKLIDSFKSSGVTLVYGDLADHESLVKAVKQVDVVISTLGGGQISDQVKLIAAIKEAGNIKRFLPSEFGMDVDRHHAVEPVTSFFNQKVKIRRAVETSGIPYTYISSNAFAGYFLPTLAQQNVTAPPRDKVIILGDGNVPAIYVKEEDIGTFTIKTVDDPRTLNKTVYFRPRGNVVTFNELVSIWENKIKSTLQKIYLPEDQILKTIQESPFPANLMLALGHSMLVKGDAANFEIESSFGVEVTELYPEVKYTTVDEYLNAFV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06776 308 Gene3D - 6 294 - -
Vifa1g06776 308 Gene3D - 154 304 - -
Vifa1g06776 308 Pfam NmrA-like family 7 297 IPR008030 -
Vifa1g06776 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 275 IPR036291 -
Vifa1g06776 308 CDD PCBER_SDR_a 6 303 IPR045312 GO:0016491
Vifa1g06776 308 PANTHER PINORESINOL REDUCTASE-RELATED 3 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06776 Vifa-Chr1 1046235904 1046237291 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06776 K23050 - gmx:100780246 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06776 1 1046235904 1046237291 Vifa1g06776 1 1046235904 1046237291 ECH