Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06772 ATGGCTTCGGAAAACAAAATCTTGATCCTTGGAGCAACAGGAGCAATTGGAAGACACATAGTTTGGGCCAGTATCAAAGCAGGAAATCCAACATATGCTTTGGTTAGGAAAACACCTGTCAATCTTAACAAGCCAAAACTAGTCACAGCTGCTAATCCTGAAACCAAGGAGGAACTTCTTGAGAATTATCAAGCTTCTGGAGTTATTCTACTTGAAGGTGATATCAATGATCATGAAACTCTTGTTAACTCTATCAAGCAAGTTGATACTGTGATCTGTGCTGCTGGTAGACTACTAATTGAAGATCAAGTTAAGGTCATTAAAGCAATCAAAGAAGCTGGAAACGTTAAGAGATTCTTCCCATCTGAGTTTGGACTAGATGTTGATCGTCACGATGCAGTTGAGCCTGTGAGACAAGTTTTTGAAGAAAAAGCGATTATCCGAAGAGTAACTGAATCTGAAGGAGTTCCTTACACTTACCTTTGCTGCCATGCCTTTACCGGTTACTTCTTACGTAACTTAGCTCAACTCGACGCCACTGATCCTCCTCGCGACAAAGTTGTCATTCTTGGAGATGGAAACGTGAAAGGAGCATATGTGACTGAGGCTGATGTTGGGACTTATACCATCAGAGCAGCAAATGATCCCAACACATTGAACAAAGCTGTCCATATAAGACTCCCAAACAACTATTTGACAACAAATGAGGTCATTGCTCTATGGGAGAAAAAAATCGGAAAAACTCTAGAGAAAACATATGTTTCAGAGGAACAAGTTCTTAAAGACATTCAAGAATCTTCATTCCCTCATAACTATCTTTTGGCTTTGTACCATTCACAACAAATAAAAGGAGATGCAGTGTATGAGATTGACCCTGCCAAAGATGTTGAAGCTTATGATGCTTATCCTGATGTGAAATACACTACTGCTGATGAATATCTAAATCAATTTGTCTGA 957 0.3939 MASENKILILGATGAIGRHIVWASIKAGNPTYALVRKTPVNLNKPKLVTAANPETKEELLENYQASGVILLEGDINDHETLVNSIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFFPSEFGLDVDRHDAVEPVRQVFEEKAIIRRVTESEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTYTIRAANDPNTLNKAVHIRLPNNYLTTNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEIDPAKDVEAYDAYPDVKYTTADEYLNQFV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06772 318 Gene3D - 163 314 - -
Vifa1g06772 318 Pfam NmrA-like family 7 307 IPR008030 -
Vifa1g06772 318 CDD PCBER_SDR_a 6 313 IPR045312 GO:0016491
Vifa1g06772 318 PANTHER PINORESINOL REDUCTASE-RELATED 4 318 - -
Vifa1g06772 318 Gene3D - 6 302 - -
Vifa1g06772 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 293 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06772 Vifa-Chr1 1045907038 1045908398 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06772 K23050 K05281 gmx:100781863 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06772 1 1045907038 1045908398 Vifa1g06772 1 1045907038 1045908398 ECH