Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06715 ATGAAAAGTTTTCGATGGAGTTTGATCGTCACTCTAACGTTCTTGTCCGTTTCACCTTTTTTGTTTGAGAAGGGTAATGGACCACTACACGTCGAAGCCTCTAATTCAGTTTCCGCTTTCGTTCAAAACGCAATCTACTCCAACAGAATCACCATCTTCTCCAAATCATATTGCCCGTATTGTTTGCGCTCCAAGCGTGTGTTTGCTGAACTGAATGAGAAGCCTTTTGTGGTTGAGCTGGATTTGCGAGATGATGGGTATGAAATTCAGGGTGTTCTTCTGGATTTGATTGGTAGAAGAACTGTTCCCCAAGTATTTGTCTATGGCAAGCATATTGGTGGATCAGATGATCTCAGTGCTGCAGTCCAGAGTGGTGAATTGCAGAAACTTCTCAAAGCAAGTTGA 405 0.4272 MKSFRWSLIVTLTFLSVSPFLFEKGNGPLHVEASNSVSAFVQNAIYSNRITIFSKSYCPYCLRSKRVFAELNEKPFVVELDLRDDGYEIQGVLLDLIGRRTVPQVFVYGKHIGGSDDLSAAVQSGELQKLLKAS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06715 134 Pfam Glutaredoxin 50 112 IPR002109 -
Vifa1g06715 134 NCBIfam glutaredoxin 50 131 IPR011899 -
Vifa1g06715 134 FunFam Glutaredoxin 2 32 134 - -
Vifa1g06715 134 CDD GRX_GRXh_1_2_like 49 130 - -
Vifa1g06715 134 ProSiteProfiles Glutaredoxin domain profile. 38 134 - -
Vifa1g06715 134 SUPERFAMILY Thioredoxin-like 39 132 IPR036249 -
Vifa1g06715 134 PRINTS Glutaredoxin signature 109 122 IPR014025 -
Vifa1g06715 134 PRINTS Glutaredoxin signature 50 68 IPR014025 -
Vifa1g06715 134 PRINTS Glutaredoxin signature 95 108 IPR014025 -
Vifa1g06715 134 PANTHER GLUTAREDOXIN 2 31 132 - -
Vifa1g06715 134 Gene3D Glutaredoxin 31 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06715 Vifa-Chr1 1041262784 1041263900 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06715 41 132 Miscellaneous Gene Families AT4G15700 32.609 5.50e-09 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06715 K03676 - gmx:100500348 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06715 1 1041262784 1041263900 Vifa1g06715 1 1041262784 1041263900 ECH