Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06714 ATGGCATTGTTTAAGAGTCGAAACAGTAGGAGATCATCATCACCATCATATGTATCAACCCTGGTAACATTAGGATTTATAGCATTATGTGTTTTTGGTGTGTGGATGCTAAACTCCAACTCTAGGCTTTCACCTGAACCAGGCGAAGAAGAGAGCACTGCCACGACCACACGAACAGCCGTTGATACATCCGAAACCAGAAACAATGATTTATCTACCTCGGATGAAACCACTGCCAAAAAAACTGAAGAAACGGTAGAAACCACCACCGTCGTTGTCCCCAAAACTGAAGAGCAAAAGGAGACTTCTACGGCCGTTTATGGAGATAATCCCGGACATCTACCTGAGGATGCCATTAAATCTGATGATAAAAACACAAACAATGATCAAAACAAACAACAGAGTGCTGTTACTGATTCTCAGATATCGGAGGAAAGCTCGATAATGCAAAAAGAACAAGTGTCTGCAATACAAGAACCTAATTTAGATGAGAAAGTTTCTGAGCCTGAGAAAGTTCAGCAAAGTAGCGTTGAAGCTGCTGAAGAAAACAAAAAGGAGGAAGAAGAGACTACCAAGCCTCAAGATGTTACAGAATCTAATGACGCAAATGTGGCTGAAAGTCAAGAACAAAGCACGGGACAACAAAGTTTTGACACACAAGGGTCTAAAAACGATGAAGATGAAGCAAATAAAGAACAATTAAGAGAAGACAAAGGTGAGAATGAAGAGAAACAGATCTCTCAAAGCTCTAAGGTAGAATCGGAGATAAATAATGGAAAGCAAAGTGAAGGTGAAGAAACAGTGAAGCCAAAAGCAAAGAAAGGAGGACATTCAAAGAAGACGTGGACAACGCAAGTAGATCAATCCCAAAACGAAAAAAAGAGACAGAAAGGCGATGAATCGGGAGGAAGTGAAGAGAAACAACAAGACTACAAGTGGAGTCTGTGTAATGTTACCGCAGGTGCTGATTATATCCCTTGTTTGGACAATGAAAAAGCCATTAAAATGTTACATTCGACAAAACACTTTGAACATAGAGAAAGACATTGTCCCGAGGACGCACCTACTTGTCTGGTGCCACTTCCTGAAGGTTATAAAACACCCATCAGATGGCCCAACAGCAGAGATAAGATATGGTACCACAATGTACCACATGTGATGCTGGCCGAGGTAAAGGGACATCAAAATTGGGTGAAGATGACAGGTGAATACCTGACATTCCCAGGAGGTGGCACCCAATTCATTCATGGAGCTTTACACTACATTGATTTTCTCCAACAGGCTGAAGCTGGTATTGCATGGGGAAAGCACACCAGGGTGATTTTGGATGTTGGCTGCGGGGTTGGAAGTTTTGGCGGTTACCTATTTGAAAGAGATGTTATTGCAATGTCTTTAGCACCGAAAGACGAACATGAAGCACAAGTTCAATTTGCACTTGAGAGAGGCATTCCTGCCATATCTGCTGTTATGGGTTCTCAAAGGCTGCCATTCCCTAACGGTGTTTTTGATCTCATTCATTGTGCGCGATGTCGAGTACCTTGGCATGCAGAAGGTGGCAAGCTGCTTTTGGAATTGAATCGAGTTTTGCGGCCAGGTGGCTATTTTGCTTGGTCTGCTACTCCTGTATACCAAAAGCTTGAAGAAGATGTTGAGATATGGAAGGAAATGACTTCACTAACTAAGGCCATGTGTTGGGAGCTTGTAACTATCAACAAGGATATACTAAACAAAGTTGGTGCTGCCATTTACCGCAAACCTACATCCAATGAATGTTACGAGCAAAGAGAGAAAAACGAACCTCCGCTATGCAAGGATGATGATGATCCAAATGCTGCCTGGTATGTACCTCTGCAGGCATGCATGCATAAGGTGCCCACAAACAAGGCTGAGAGAGGAACCAAATGGCCTGAAGTTTGGCCTCAACGAGTGCAAAAAGCCCCATATTGGTTAAACAACTCACAGGTGGGGATCTATGGAAAACCAGCTTCTAAAGATTTTGTAGAAGACACTGAACGTTGGAAGAACGTGATGGACGAGCTGACCAACATTGGTGTAACTTGGGCTAACGTGAGAAATGTCATGGACATGAGAGCTGTCTATGGAGGATTTGCAGCAGCACTGAGGGAACTTCCAATTTGGGTGTTCAATATAGTGAACATAGATGCTCCTGACACACTACCAATAATCTATGAGAGGGGTCTTTTTGGGATATACCATGACTGGTGTGAATCATTCAGCACGTATCCACGATCTTACGATCTACTTCACGCAGATAAACTTTTCTCCAAGATTAAAGAGAGGTGCAAACTTGTTCCTGTTATTGCAGAGGTTGATAGAATAATGAGACCGGGAGGGACATTGGTTGTTCGCGATGAACCTAGCATCATCAGCGAAGTGGAGACTTTGTTAAAATCTCTACATTGGGAAATAATCTACTCCAAAGAACAAGAAAGTTTGCTCTCTGCAAGGAAAGGAACTTGGAGGCCTATTACCATAGCTTCTTCCTGA 2508 0.4274 MALFKSRNSRRSSSPSYVSTLVTLGFIALCVFGVWMLNSNSRLSPEPGEEESTATTTRTAVDTSETRNNDLSTSDETTAKKTEETVETTTVVVPKTEEQKETSTAVYGDNPGHLPEDAIKSDDKNTNNDQNKQQSAVTDSQISEESSIMQKEQVSAIQEPNLDEKVSEPEKVQQSSVEAAEENKKEEEETTKPQDVTESNDANVAESQEQSTGQQSFDTQGSKNDEDEANKEQLREDKGENEEKQISQSSKVESEINNGKQSEGEETVKPKAKKGGHSKKTWTTQVDQSQNEKKRQKGDESGGSEEKQQDYKWSLCNVTAGADYIPCLDNEKAIKMLHSTKHFEHRERHCPEDAPTCLVPLPEGYKTPIRWPNSRDKIWYHNVPHVMLAEVKGHQNWVKMTGEYLTFPGGGTQFIHGALHYIDFLQQAEAGIAWGKHTRVILDVGCGVGSFGGYLFERDVIAMSLAPKDEHEAQVQFALERGIPAISAVMGSQRLPFPNGVFDLIHCARCRVPWHAEGGKLLLELNRVLRPGGYFAWSATPVYQKLEEDVEIWKEMTSLTKAMCWELVTINKDILNKVGAAIYRKPTSNECYEQREKNEPPLCKDDDDPNAAWYVPLQACMHKVPTNKAERGTKWPEVWPQRVQKAPYWLNNSQVGIYGKPASKDFVEDTERWKNVMDELTNIGVTWANVRNVMDMRAVYGGFAAALRELPIWVFNIVNIDAPDTLPIIYERGLFGIYHDWCESFSTYPRSYDLLHADKLFSKIKERCKLVPVIAEVDRIMRPGGTLVVRDEPSIISEVETLLKSLHWEIIYSKEQESLLSARKGTWRPITIASS 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06714 835 FunFam probable methyltransferase PMT23 413 597 - -
Vifa1g06714 835 Coils Coil 170 190 - -
Vifa1g06714 835 MobiDBLite consensus disorder prediction 221 249 - -
Vifa1g06714 835 MobiDBLite consensus disorder prediction 258 272 - -
Vifa1g06714 835 MobiDBLite consensus disorder prediction 42 73 - -
Vifa1g06714 835 CDD AdoMet_MTases 441 535 - -
Vifa1g06714 835 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 632 814 IPR029063 -
Vifa1g06714 835 MobiDBLite consensus disorder prediction 163 195 - -
Vifa1g06714 835 MobiDBLite consensus disorder prediction 290 307 - -
Vifa1g06714 835 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 25 828 IPR004159 GO:0008168
Vifa1g06714 835 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 323 818 IPR004159 GO:0008168
Vifa1g06714 835 Gene3D Vaccinia Virus protein VP39 432 599 IPR029063 -
Vifa1g06714 835 MobiDBLite consensus disorder prediction 42 309 - -
Vifa1g06714 835 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 346 600 IPR029063 -
Vifa1g06714 835 Coils Coil 224 244 - -
Vifa1g06714 835 MobiDBLite consensus disorder prediction 84 106 - -
Vifa1g06714 835 MobiDBLite consensus disorder prediction 196 220 - -
Vifa1g06714 835 MobiDBLite consensus disorder prediction 128 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06714 Vifa-Chr1 1041258863 1041262004 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06714 - - lang:109333262 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06714 1 1041258863 1041262004 Vifa1g06714 1 1041258863 1041262004 ECH