Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06700 ATGTTGGCAGAGGAATGGACCGCACTGATGCTCATATGCCCCCTCGCGTCTTTCCGGAAGAAGAGATACTTTCCATTCTGCTTCAGCCTCACCAGCAAAGTGAGTGTTGTCCGAATTTTCCCAATGGAAAAAACAGAGTCAGATTTGGATCCAGAGCAGCTCCATATGATGGAGACTGGTTTTTCACGGACTATGCAAATCGATCCTAGAAGGTCTCGATTCCCGTGCTCCATCGTGTGGTCGCCACTTCCCGTCATTTCTTGGTTCATTCCTTTTATCGGCCACATTGGAATCTGTAGAGAAGATGGAGTCATTTTGGATTTTGCAGGCCCTAATTTTGTTTGCGTTGATAATTTCGCATTCGGAGCCGCTACTCGATATGTCCAAATCCCTAAAGATAAGTGTTGCATCCCTTTAGGCGAGTTGAGGACCTGGGACGATGCTCTACTGAAAAGCACTCAAGAATTCCAACACCGATCCTACAGTCTCTTTACATGCAACTGCCACTCCTTTGTTGCCCATAACTTGAACAGGCTCACCTACCTGTCTAGCAGATGGAATGTGGTGAACCTTGCAATTTTCATTTTACTCAGCGGCCGCTGGGTCAACAAAACATCTATGCTGCGAACCATTTTACCATTTCTGCTTGTTTTTTTTCTTGGACTCACATTCGGAGGCTTCACTTTCTTCAAATTTTGGTTCTTATTCACTTCGCTTCTAATTGTTATTCATCAACATCATGGAGCATGTGGTATCTTCCTCTTAAAAGCTCAACATCATGGCAAACTCTTAAAAAGTATATTCGATATGGTTTTTTTTACTGATATTATCTTTTACACGACAACCAGTAAAAATGTAAAGCAAGGACATGTAGATTTGGTGTCGCCGCAAGATGTTGGGTTCTACCATTACGTAGATCTTGAGTTGGTGGACAAATTTTTTTCTTTTGACAGTGTAGAGAAGGTGGATGAGGCTCAAATAGAAGTGGACCCTTCTTTTGATTGA 1005 0.4269 MLAEEWTALMLICPLASFRKKRYFPFCFSLTSKVSVVRIFPMEKTESDLDPEQLHMMETGFSRTMQIDPRRSRFPCSIVWSPLPVISWFIPFIGHIGICREDGVILDFAGPNFVCVDNFAFGAATRYVQIPKDKCCIPLGELRTWDDALLKSTQEFQHRSYSLFTCNCHSFVAHNLNRLTYLSSRWNVVNLAIFILLSGRWVNKTSMLRTILPFLLVFFLGLTFGGFTFFKFWFLFTSLLIVIHQHHGACGIFLLKAQHHGKLLKSIFDMVFFTDIIFYTTTSKNVKQGHVDLVSPQDVGFYHYVDLELVDKFFSFDSVEKVDEAQIEVDPSFD 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06700 334 PANTHER UNCHARACTERIZED 56 239 IPR008496 -
Vifa1g06700 334 Pfam Protein of unknown function (DUF778) 83 132 IPR008496 -
Vifa1g06700 334 Pfam Protein of unknown function (DUF778) 143 201 IPR008496 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06700 Vifa-Chr1 1039385159 1039390305 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06700 K20726 - gmx:100527909 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06700 1 1039385159 1039390305 Vifa1g06700 1 1039385159 1039390305 ECH