Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06454 ATGGCAAGCAAGTACCATGTTCGCTCAAATAGTTTTCCTTCTCAATCTCATCCAAGCTCTACAAGAATTGAACAAGAACTCAACAAAATCAAGACATGGGAAACCGCTTCAACATCCACATCTGATTCAATTAGCAATGGTCTTTCCATGCTTGAAGATCTGTATATTTCTTTGGAAGTTCTTCTCAATACCACATCAACACAAAAGGTCATTTCTCATCATCAAGGTGAGAAATTCGTGGAAGAGTTGTTGGATGGTTCAATTAAAATATTGGATATTTGTGGGATCACAAGAGATACCATGTTAGAAATTAAAGAAAATGTTCAATCACTTCAATCTTCTCTTAGAAGGAGAAAAGGAGATTCAAGCATTGAAACAAGCGTATACGAATATAAATTATTCACAAAGAAGATGAAGAAGAATGTCACAAAACTGATCTCATCTTTAAAACATATGGAATGTAAATTTGGAGCTGCCTCACTTTTAAATCAAGGTCAAGATGTTGTTGCAGTGACAAAAGTACTTAGAGAGGTCATTGTAATAAACATGTCTCTCTTCCAATCCATTTTGTCTTTCTTGGTTGGACATGCATCAAAGTCAAAGGCAACTAAATGGTTGAAAGTGGCAAAGTTGATGCATAAAAAGGAAGTGTCATGTGAAGAGAGTTCGGAGAATTTCAATGAACTGCAGTGTGTAGAAGTATCTTTAAGAACCCTTTTAAGTGAAGGTTCTGATGTTACAAAGATGCAGGCTACACGTGAAAGTTTGGAGGATTTGGAGAATGCTGTTGAAAGGATAGAGAATGGTTTGGAGAGTGTGTTTAGGCGTTTGGTTAAAGCTAGAGTTTCTCTTTTGAACATCATGACTCAATAG 873 0.3608 MASKYHVRSNSFPSQSHPSSTRIEQELNKIKTWETASTSTSDSISNGLSMLEDLYISLEVLLNTTSTQKVISHHQGEKFVEELLDGSIKILDICGITRDTMLEIKENVQSLQSSLRRRKGDSSIETSVYEYKLFTKKMKKNVTKLISSLKHMECKFGAASLLNQGQDVVAVTKVLREVIVINMSLFQSILSFLVGHASKSKATKWLKVAKLMHKKEVSCEESSENFNELQCVEVSLRTLLSEGSDVTKMQATRESLEDLENAVERIENGLESVFRRLVKARVSLLNIMTQ 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06454 290 MobiDBLite consensus disorder prediction 1 23 - -
Vifa1g06454 290 Coils Coil 249 276 - -
Vifa1g06454 290 Pfam Protein BPS1 47 287 IPR004320 GO:0048364|GO:0048367
Vifa1g06454 290 PANTHER OS06G0725500 PROTEIN 2 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06454 Vifa-Chr1 1003100353 1003101225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06454 - - gmx:100802325 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06454 1 1003100353 1003101225 Vifa1g06454 1 1003100353 1003101225 ECH