Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06429 ATGGCAAACAAGTACCATGTTCGTTCCAATAGTTTTCCTTCCCAATCTCATCCAAGCACCATTAGATTAGAACAAGAGATAAACAAAATAAAGACTTGGGGAGCCACATCAACGTCTACATCCGATTCAGTTACCACTGGCCTTTCTTTGCTTGAAGATTTATATATTTCATTGGAAGATCTTCTCAATATAACATCAACACAAAAGGCTATTTCTCTCCGTCAAGGTGAGAAATACGTGGAAGAGTTGTTGGATGGTTCAGTGAAAATTTTGGATGTATGTGGCATCGCAAGGGACACCGTGTTACAAATTAAGGAAAATGTTCAATCACTTCAGTCTTCTCTTAGAAGAAGAAGAAAAGGAGATTCAATCATTGAAACAAGTGTAGCCGAATATAAATTCTTCACAAAAAAGATGAAGAAGAATGTCACAAAGTTGATCACATCTTTAAAACATATGGAGAGTAAATTTGGAGTTTCCTCGCTTTTGAATCAAGATCAAGACTTCGTTGTTGTTGTAAGAGTTCTTAGAGAGGTCATAGTAATGAACATGTCCATCTTTCAATCACTTTTATCTTTCTTGGCTGTCTCTGCATCAAAGTCAAAGGCAAACAAATGGTTTAAAGTGGCTAAATTGATGCACCAGAGGGTAGTATCATGTGAAGAGAATATGGAGAATTTCAATGAATTGGAGTGTGTAGAAGCATCGTTGAGAACCCTTTCAAGTGAAGGTTCTAATGTTTCAAAGATGCAGGATGCACATGAAAGATTGGAAGCTTTGGAGAATGCAATTGAAAGAGTAGAAAATGGTTTGGAGAGTATATTTAGGCGTTTGATTAAAACCAGAGTTAGTCTTTTGAACATCGTGACTTTATCTTAG 879 0.3641 MANKYHVRSNSFPSQSHPSTIRLEQEINKIKTWGATSTSTSDSVTTGLSLLEDLYISLEDLLNITSTQKAISLRQGEKYVEELLDGSVKILDVCGIARDTVLQIKENVQSLQSSLRRRRKGDSIIETSVAEYKFFTKKMKKNVTKLITSLKHMESKFGVSSLLNQDQDFVVVVRVLREVIVMNMSIFQSLLSFLAVSASKSKANKWFKVAKLMHQRVVSCEENMENFNELECVEASLRTLSSEGSNVSKMQDAHERLEALENAIERVENGLESIFRRLIKTRVSLLNIVTLS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06429 292 PANTHER OS06G0725500 PROTEIN 2 289 - -
Vifa1g06429 292 Coils Coil 250 277 - -
Vifa1g06429 292 Pfam Protein BPS1 47 288 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06429 Vifa-Chr1 1000261818 1000262696 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06429 - - gmx:100801793 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06429 1 1000261818 1000262696 Vifa1g06429 1 1000261818 1000262696 ECH