Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06371 ATGATGGAGAGAGCAGATTCTGTGCAGAAGCTGTACACGCGTATGCGACTATGGGAATTTACCGATCAGTATGTGATTGAGCCTACTGATGGCTCTTCTGGTTCGTCTTTGGCTGTTAGTCGAGTTGATGGCTCGATGAAACTAATCGATGAGGTTCCAGAATGTACCACTCTCCGAGTTCCTAAGATTTTTACGATTTATGGTGTTGTTGGGATAGTGAGGCTTTTGGCTGGATCATATTTGATGGTCATAACTGAGCGTGAATGTGCTGGATCTTACTTGGGGCATCCAATTTTCAAAATTACATCCATGAAGGTTTTTCCATGTGATCATTCACTTAAAAGTACCCCTGCTGAACAGAAAAAGGTGGAGATGGAATTTTCTGGCCTACTAAATGTTGCTGAGAAAACTTCTGGCCTGTTCTTCTCATATGAAACTAATTTAACTCTGAGTGCCCAGCGGTTGAATGACCTGGGTGATGAGTCTAGATTGCTTCCTCTTTGGAGACAGGCAGAGCCTCGATTTCTATGGAACAATTATATGTTAGAAGTGCTCATAGATAATAAGCTTGACCCATACTTACTCCCTATAGTCCAAGGCAGTTTTCATTACTTTCAAGCAGCCATTGGGAAAGATATTATTGATGTCACTTTGATTGCGAGGAGATGCACAAGAAGAAATGGAACTCGAATGTGGAGAAGAGGAGCTGATCCAGATGGATATGTTGCCAATTTTGTGGAAACAGAACAACTTATGCAGTTCAATGGGTATACTGCCTCATTTGTTCAGATTCGTGGTTCGATTCCTCTGCTCTGGCAGCAAATTGTTGACTTAACATATAAACCGAAGTTTGAATTATTGAAACTTGATGACGCTCCACGAGTCCTCGAGAGGCATATATTAGATTTAAGAAAAAAATATGGAGCTGTGCTGGCTGTTGATCTTGTTAACAAGCATGGAGGAGAAGGGCGGCTATGTGAAAAATTTGGCAGTACAATGCAGCATGTGGCTAGTGATGATGTAAGATATGTTCACTTTGATTTTCATCATGTCTGTGGACATGTTCATTTTGAACGTCTATCATTGCTTTATGATCAAATATCAGATTTCCTTGAGAGAAACGGATATCTTTTATTGAATGAAAAGGGAGAGAAAATGAAGGAACAACTTGGAGTTGTTAGGACCAACTGTATTGATTGTCTCGACCGAACAAATGTAACTCAGAGCATGATAGGCCGAAATATGTTAGAATACCAGCTTAGAAGGCTTGGAGTCTTTGGGGCTGAAGAAACCATCAGTTCTCATCCAAATCTTGATGAAAGGTTTAAGATCTTGTGGGCTAATCATGGGGATGATGTAAGTATCCAATATTCAGGAACTCCTGCTCTGAAAGGAGACTTTGTCAGGTTTGGGCACCGCACCGTTCAGGGGATAGTAAACGATGGTTTGAATGCTCTCCAAAGATATTATTTGAATAACTTTTGTGATGGAACAAAGCAGGATGCAATTGATCTCCTGCAAGGACATTATATAGTATCTGTTGGCCGAGATACAGCTGCCTCTTCTCAGAAAGGAGGAATTGAAGCTATAGCTTCGTTTCCTCTGGCTTTTGCACTGGTTTTAACTGGATTTTTTTTTGCAACCATGTCATTGAGACAAGTTCAATATGATTTTAGGCACGCCTTCTTTTCACTAATGTGGGCCGGCATAAGTGTCGGTTTAGCAGCTTTTGTGAGGGCCAATGGACGGGTTTTCTGCAACAGACCCCGCCTAAACAATCCCCATCGTTAA 1791 0.4126 MMERADSVQKLYTRMRLWEFTDQYVIEPTDGSSGSSLAVSRVDGSMKLIDEVPECTTLRVPKIFTIYGVVGIVRLLAGSYLMVITERECAGSYLGHPIFKITSMKVFPCDHSLKSTPAEQKKVEMEFSGLLNVAEKTSGLFFSYETNLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEVLIDNKLDPYLLPIVQGSFHYFQAAIGKDIIDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQLMQFNGYTASFVQIRGSIPLLWQQIVDLTYKPKFELLKLDDAPRVLERHILDLRKKYGAVLAVDLVNKHGGEGRLCEKFGSTMQHVASDDVRYVHFDFHHVCGHVHFERLSLLYDQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGVFGAEETISSHPNLDERFKILWANHGDDVSIQYSGTPALKGDFVRFGHRTVQGIVNDGLNALQRYYLNNFCDGTKQDAIDLLQGHYIVSVGRDTAASSQKGGIEAIASFPLAFALVLTGFFFATMSLRQVQYDFRHAFFSLMWAGISVGLAAFVRANGRVFCNRPRLNNPHR 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06371 596 Pfam SacI homology domain 67 352 IPR002013 GO:0016791
Vifa1g06371 596 ProSiteProfiles Sac phosphatase domain profile. 131 459 IPR002013 GO:0016791
Vifa1g06371 596 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06371 Vifa-Chr1 992251576 992262003 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06371 2 594 Acyl Lipid Metabolism Gene Families AT3G51460 73.109 0.0 965
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06371 K21797 - gmx:100796999 1117.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06371 1 992251576 992262003 Vifa1g06371 1 992251576 992262003 ECH