Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06285 ATGAGCATGACCATTACTCTTAAAAAAGATTGGAAAGTTATATGTGACATAGAGTGTCCTCATCCACCGGCTGACTTATATGGATTGCCAAGAGAGTTGAATATAGATTCATTTGTTTCAAGGAGAAAGATATCGGATATTTCTGCTTTGCCACAGTTTTCAGTAGCACCTGCTCCAAAGTCTACACGTGACAAGAATGAGTGGGGAAGGTTTTCGAATTTCATGCACAAGCAAGACAATGTTGCTATTGCAAGCTTTGAGCAGTGCAAGTTCTACTTTTTGCCTCCACCGAAAGCATCTATATCATGCTCAGTTAATGTTGCATATCAAATAGGCAGCACATCTACTGTAGATACTCGTCCAAGAGATTGTGAATCAGGTTCACACATAGCTGAGGAATATGGTGGACACAATACTATCATGGCAAGAGGTCCACCAAATGGTGGAGATGCCTCCTCCTCACTTCCAAAGTTTCCCCCTGCGGAAGATCGCGCACATCATTTTACATCTGAAACCTGTGGTGGAATTCAATCACATGCGATGCAGGAAAGACTTCCTGAGAAAAATTTCATACGAGCAGACCCAAGTTACCTGAAAACTCTTGGCCAGGCTCACTCTGGATGGATTTTTGGTGGAATAGCTGAGCTTGTTGATAATTCACGGGATGCCAAAGCAACTAAGATTGATATTTTTGTTGATATGATAAAGATGAAGAAATCTGGGAACGATGTACCCATGCTGTCAGTAATTGATGATGGTCAAGGGATGAACCATGATGAGATTATGAGAATGGTATCTTTTGGGCACAAAAAATCTGACTATGATGACAAGGACCAAATCGGTAGATTTGGTGTTGGATTCAAGACAGGAGCAATGAGGCTTGGCAAAGATGTTCTTGTTCTAACCCAGACTGCTAATTCCAGATCTATAGCTTTTCTTTCACAATCATTGAATGAAGGCAAGGATAATATAGAGATTCCCATTGTTAGTTACTGCCGGCAAGGACAACAAATGGAAGTTGACACAAAAGCGCAATCAGATAAATTGGCAAAATACAATTTAAAAGCTATTAAGGAGTTCTCACCGTTTAATAAGTATCTTATTGGTGAAAAGGCAGCCTTGTTTTGTGGTGGTACGGGAACCCAAATATATATATGGAACTTGGATGAATGGGGGTCAGGGTGTTGCCTAGAGTGGCATGATGGATTGAAAGGTGGGAGTTCTTTTCATCAAGGTGATATTTTCATCCGCAGCAGAAGGAGTCGTTCTCGTCTAGGCCAACTTAATCAAAAGGTTCCTTTGGATTTCTCTTTACGAGCTTATTTGGAAGTCATCTTCTTAGTTCCTCGAATGAAGATATGTGTTCAAAGGAAACTGGTTAAAAGTCGACCGCTAGCAAATTTCCTCACTAAAACGATTATTGAAAGTGGTGAGATATTGAAAAGGCCAGTTGAATTGACTCTAGGACTTAGTCAATTAGAATGGGATCAAGCAAACTGTGGAGTATTTCTGTATTGGCATGGTCGCTTAATTGAGGCTTACAAGAGAGTTGGTGGCATGATTCATAGTGCAGATGTGGGTCGGGGTGTAATTGGTGTCATGGATGTGACCAATTTAATCGATGATCTGGATGGTCGTGTGTGGGTGCATAATAACAAGCAGGGATTCCAAGATTGTGAAGCATATGCATGTCTTGAGCAGTGGCTTGGGGAAAAAGCAGATGAATACTGGGACACTAATTTTGATTCACTTCATTTGGACAAGGATAACTGTGTCTACAAACCAGATTGTGAGTGGGTGCAATGTGACAAATGCCGAAAGTGGAGAATGTTGCCTTCAACCTTTGACAGCGGAGCGTTGGCTACGCAATGGATATGA 1878 0.4127 MSMTITLKKDWKVICDIECPHPPADLYGLPRELNIDSFVSRRKISDISALPQFSVAPAPKSTRDKNEWGRFSNFMHKQDNVAIASFEQCKFYFLPPPKASISCSVNVAYQIGSTSTVDTRPRDCESGSHIAEEYGGHNTIMARGPPNGGDASSSLPKFPPAEDRAHHFTSETCGGIQSHAMQERLPEKNFIRADPSYLKTLGQAHSGWIFGGIAELVDNSRDAKATKIDIFVDMIKMKKSGNDVPMLSVIDDGQGMNHDEIMRMVSFGHKKSDYDDKDQIGRFGVGFKTGAMRLGKDVLVLTQTANSRSIAFLSQSLNEGKDNIEIPIVSYCRQGQQMEVDTKAQSDKLAKYNLKAIKEFSPFNKYLIGEKAALFCGGTGTQIYIWNLDEWGSGCCLEWHDGLKGGSSFHQGDIFIRSRRSRSRLGQLNQKVPLDFSLRAYLEVIFLVPRMKICVQRKLVKSRPLANFLTKTIIESGEILKRPVELTLGLSQLEWDQANCGVFLYWHGRLIEAYKRVGGMIHSADVGRGVIGVMDVTNLIDDLDGRVWVHNNKQGFQDCEAYACLEQWLGEKADEYWDTNFDSLHLDKDNCVYKPDCEWVQCDKCRKWRMLPSTFDSGALATQWI 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06285 625 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 201 343 IPR036890 -
Vifa1g06285 625 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 213 331 - -
Vifa1g06285 625 Gene3D - 182 371 IPR036890 -
Vifa1g06285 625 Gene3D - 586 625 - -
Vifa1g06285 625 Pfam CW-type Zinc Finger 598 624 IPR011124 GO:0008270
Vifa1g06285 625 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 178 597 IPR045261 GO:0016887
Vifa1g06285 625 Pfam Morc6 ribosomal protein S5 domain 2-like 436 577 IPR041006 -
Vifa1g06285 625 ProSiteProfiles Zinc finger CW-type profile. 593 625 IPR011124 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06285 - - cam:101494973 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06285 1 982379142 982400071 Vifa1g06285 1 982379142 982400071 ECH