Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06196 ATGGCGTTTGAGGAAGTCGCGTATTCAAGGCCTCTTTTCCTCACGATCTACACCGTTGTTATCGTTGGCATCGTTGTTTCCTCCTTATACGTCTTCTCTGCAATTCACTACTCTCCCACAACCTCCTCTTCTGCTTGGTCTTCTTTTCCTCCTCTTTCAAATGATGATTCACGGCTTAACATTTCTCAATCAGAAGTGGTGCGTCTTGTACCCTCTGCTTACACTGAGACACAAAATGTGTCAAAGAAGCCTGTTTTGGATGTTCCTCCTCGCAATACAAAGATGCCGCCTTTGGAAGATTTTAAACTGACCAAAGAACTTGTTCAACAAAGGGTGAAAGATAACATTATAATAGTTACATTTGGTAACTATGCTTTCATGGACTTTATTCTGACATGGGTTAAGCAATTGAATGATCTGGGCCTTTCCAATTATGTTGTTGGTGCAATGGACACCAAATTATTGGAGGCACTTTACTGGAAAGGGATACCGGTTTTTGACATGAACAGTCATATGAGTACCGTAGATGTTGGCTGGGGTTCTCCAACATTTCATAAGATGGGGAGAGAAAAAGTTATTTTGATAAACTCCATACTGCCTTATGGTTACGAACTATTGATGTGTGATACTGACATGGTTTGGTTGAAGAATCCACTTCCATATCTTGCTCGTTATCCCGGAGCAGATGTTTTAACATCCAGTGATCAAGTTGTACCAACCGTTGTCGATGATAGTCTGGAAGTTTGGCAAGAAGCTGGTGCGGCTTACAATATAGGAATTTTTCATTGGAGACCTACAGAGTCTGCGATAAAATTGGCAAAGGAATGGAAGGAACTGCTTCTGGCTGATGATACGATATGGGATCAGAATGGGTTTAATGAAATTGTCCATAGACAGTTAGGACCGTCGGTTGACGAGGACAGTGGACTTGTTTATGCTTATGATGGAAAACTAAAGCTGGGAGTTTTGCCTTCAAGTATATTCTGCAGTGGCCATACATACTTTGTCCAGGCGATGTATCAGCAACTCAGGTTGGAGCCGTATGCAGTGCACACTACATTTCAATATGCAGGGACTGAAGGAAAGCGCCATCGACTACGAGAAGGCATGCTTTTCCATGACCCACCTGAATACTATAATCCTCCTGGGGGTTTCTTGTCATTTAAGCCATCTATTCCGAAAAGCTTGTTACTAATCGGGAACCATACCGTTGGATCACATTTTACCCTCATTAACTACCAAATGAAACAGATTAGGACCGCACTTGCAATTGCCTCCCTTCTTAACAGAACGCTGGTCATGCCCCCACTATGGTGCAGGATTGATCGGCTATGGTTCCCCCATCCAGGTGTTTTGGAGGGGTCTATGACTAGACAGCCTTTTCTTTGTCCTTTGGATCATGTATTTGAGGTGCATGTCATGTTGAAAGAACTCCCGGAGGAAGAGTTTGGCCCCGGAATAGATATTAGAGAGTACTCCATACTTGATAATCCGTCATTTCCCTTAGAGGTGAAAAAGTCATGGCTTAATGTTCACCTTTGTAAAGAAGGAACGCAAGATTGTATTGCATCAAATAATGTAACTGTTGGGGGAGTACTTAAATTTCCCAAACATAGCAAAGAAGAAACGTTCATGAAAGTATTTTCGTCCTTCAAGGATATAAAAGTCATCCAGTTCTCGTCGATGCGAGACGCATTTACAGGTTTCACAAACAAGGAAAGAGATGATAGATTCAGAACACGAGTTAAACATTACACCGGTATATGGTGCTGTGTGGGGGATCACACGCCGGGTCACATATATTATGATATGTATTGGGATGAGAAACCTGGATGGAAGCCAATCCCTCCTCAAACTTCTGCAGATGATCATCCACCTTGGTGA 1884 0.4252 MAFEEVAYSRPLFLTIYTVVIVGIVVSSLYVFSAIHYSPTTSSSAWSSFPPLSNDDSRLNISQSEVVRLVPSAYTETQNVSKKPVLDVPPRNTKMPPLEDFKLTKELVQQRVKDNIIIVTFGNYAFMDFILTWVKQLNDLGLSNYVVGAMDTKLLEALYWKGIPVFDMNSHMSTVDVGWGSPTFHKMGREKVILINSILPYGYELLMCDTDMVWLKNPLPYLARYPGADVLTSSDQVVPTVVDDSLEVWQEAGAAYNIGIFHWRPTESAIKLAKEWKELLLADDTIWDQNGFNEIVHRQLGPSVDEDSGLVYAYDGKLKLGVLPSSIFCSGHTYFVQAMYQQLRLEPYAVHTTFQYAGTEGKRHRLREGMLFHDPPEYYNPPGGFLSFKPSIPKSLLLIGNHTVGSHFTLINYQMKQIRTALAIASLLNRTLVMPPLWCRIDRLWFPHPGVLEGSMTRQPFLCPLDHVFEVHVMLKELPEEEFGPGIDIREYSILDNPSFPLEVKKSWLNVHLCKEGTQDCIASNNVTVGGVLKFPKHSKEETFMKVFSSFKDIKVIQFSSMRDAFTGFTNKERDDRFRTRVKHYTGIWCCVGDHTPGHIYYDMYWDEKPGWKPIPPQTSADDHPPW 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06196 627 PANTHER ARABINOSYLTRANSFERASE XEG113 8 627 - -
Vifa1g06196 627 Pfam Nucleotide-diphospho-sugar transferase 142 366 IPR005069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06196 Vifa-Chr1 968914991 968918842 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06196 K20784 - gmx:100776463 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06196 1 968914991 968918842 Vifa1g06196 1 968914991 968918842 ECH