Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06185 ATGGGAGATTTAGACGAAGCGAATTTACAGAAGGGAATCGATAAGGAAAGCTCAAGACCAATAAAAGACCTTTCGACTCCGGTGTGCTCAGCACATCAGATGGGGAGTTGTCGGATGGGATCTGATCCGACACAATCGGTTGTGAAGCAGACAGGGGAAACATGGGAAATGGAGGGACTTTATGTGGCAGATACAAGTGTGTTTCCAACAGCTTTGGGTGTTAATCCAATGATCACTGTTCAATCAATTGCTTACTGCACTGCACAATCTGTTCTTCATGTTCTTAAGAGGAAAACAAGTAAATGA 306 0.4346 MGDLDEANLQKGIDKESSRPIKDLSTPVCSAHQMGSCRMGSDPTQSVVKQTGETWEMEGLYVADTSVFPTALGVNPMITVQSIAYCTAQSVLHVLKRKTSK 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06185 101 Pfam GMC oxidoreductase 29 86 IPR007867 GO:0016614
Vifa1g06185 101 SUPERFAMILY FAD/NAD(P)-binding domain 24 92 IPR036188 -
Vifa1g06185 101 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 6 100 - -
Vifa1g06185 101 Gene3D - 10 99 IPR036188 -
Vifa1g06185 101 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06185 Vifa-Chr1 967330702 967331123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06185 9 95 Acyl Lipid Metabolism Gene Families AT4G19380 66.667 5.84e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06185 K17756 - pvy:116138578 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06185 1 967330702 967331123 Vifa1g06185 1 967330702 967331123 ECH