Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06175 ATGCCTTCCCCCCAAAACATTGACCAACAAGACCATCATCATGATCAAGCTCATCATCATGATCATGATCATGATCATGATCATAATCATAACCATCCTCAACCTCATCATAGAAAACCCAAAAAAAGAATAGTAACTCACCAAAATGGAAACACAAATTTCTTGATTTGGCTAGCCGCAATACTATGCACAATAATAGCCATAGGAGTTGTAATTGGAGGAGTTGTAGTGTTTGTTGGTTACATAGTTATTCATCCAAGAGTTCCTACAATAAGCATAGCAAATGCTCATTTAGATCTTTTCAAAAATGACTATGCTGGTCTTCTACAAACACAGATAAGCATAAGTGTGATGGCACAAAATGGAAACTTTAAGGCACATGCAACATTTTCAAATATAAAATTCAAACTTAGCTATCAAGGACAAGGTATTGCATATATGGTTGCCGATACTTTTGATGTTCCTAAGAATAATTCAAGGTTTTTGGATTATGTTGTTCAATCTTCTTCTATTCCTTTGACTCCTGATCAGGTGGAAGAAGTTGATGAGTCATGGAAGAGAAATATTGTTGGGTTTGATTTGAAAGGTGATGCTAGAACTCAATGGAGAATTGGACCTTTTGGTTCTTTTAAATTTGGTTGTAAACTTGAGTGTCAACTTAGATTTCATCCCTTGAATGGTAGTTATATTCCTTCACGTTGCACTTCTCAATCCAAATGA 720 0.3528 MPSPQNIDQQDHHHDQAHHHDHDHDHDHNHNHPQPHHRKPKKRIVTHQNGNTNFLIWLAAILCTIIAIGVVIGGVVVFVGYIVIHPRVPTISIANAHLDLFKNDYAGLLQTQISISVMAQNGNFKAHATFSNIKFKLSYQGQGIAYMVADTFDVPKNNSRFLDYVVQSSSIPLTPDQVEEVDESWKRNIVGFDLKGDARTQWRIGPFGSFKFGCKLECQLRFHPLNGSYIPSRCTSQSK 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06175 239 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 235 - -
Vifa1g06175 239 MobiDBLite consensus disorder prediction 1 42 - -
Vifa1g06175 239 MobiDBLite consensus disorder prediction 8 30 - -
Vifa1g06175 239 Pfam Late embryogenesis abundant protein 119 218 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06175 Vifa-Chr1 966061078 966061797 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06175 - - psat:127121498 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06175 1 966061078 966061797 Vifa1g06175 1 966061078 966061797 ECH