Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06114 ATGCTAAAAGCTCTTGCTGCGCTTTCTCCTTCCCTCTCCGCATCTAGTGTTGGGAAGAGAATGTGTACTTCACCAACACCACCAAAATTTCCCAAATTTATTTCAGTTGAAGCCACTGATATACATTCCAGAACTAAACCTGACGGCTTCAGATTCAGCCTTGTTTCCTATAACATTTTGGCTCAGGCTTATGTCAAGAGCATTATTTTCCCATACTCTCCTCGTTCGTCTCTCAAATGGAATCGTCGTTCGAACTCGATTTTAGATGTTCTTAAGAACTTGGGAGCTGATTTTTTCTGTCTGCAGGAACTTGATGAATTTGATAGCTTTTACAAAGGAAAGATGCATGAGTTGGGATATTCTTCAATTTATATGAAGAGGAGTGGAGAGAAAAAGCGTGATGGATGTGGGATATTTTACAAGGATGAACTTGCAGAGTTGGTCTTGGAGGAAAAAATTGAATACAATGATCTTGTAAAGACAATTCCAGACGGGAACTCTTCAAATGACGATGAACACAACAATGTCAAAACAACCCAGCTAGATAAACAAAAGGATGTTGCGACCAATACTGGACCTAAATCGGGTACAGAAGATCGTGGAGATCCGAATGATCCTCGTGTGAGACTAAAGCGTGATTGTGTTGGAATTCTTGCTGCATTCAAATTCAAAGGTCCCCCTCATCAGTTTCTTATTGTAGCCAACACACATATTTATTGGAATCCTGAGTGGGCTGATGTCAAACTTGCACAAGCTAAATATCTTCTATCTCGCCTGTCACAGTTTAAAACACTGGTGTCTGATAGATTTGAATGCACACCTGAAGTGATTGTGGCCGGTGATTTCAACTCTCAGCCAGGAGATCCGGTTTATCAGTACCTCATATCAGGCAACCCTTCATCAGAACTGATAACTGACTGTATAGAGGAGCTTCCCATTCCTCTAAGTAGTGTCTATGCTTCTACTAGAGGAGAGCCACCATTTACAAACTATACACCTGGCTTCACCGGAACACTCGATTATATATTATGTTGCCCCTCTGACTATATGAAACCAATTAGTTATCTTGAGCTTCCAGACTCCGAAGCGGCAGATATTGCTGGTGGACTGCCAAACTTAAGTCATCCAAGTGATCATCTACCAATTGGTGCTGAATTCGAAATAGTGAAGGAATAA 1176 0.4116 MLKALAALSPSLSASSVGKRMCTSPTPPKFPKFISVEATDIHSRTKPDGFRFSLVSYNILAQAYVKSIIFPYSPRSSLKWNRRSNSILDVLKNLGADFFCLQELDEFDSFYKGKMHELGYSSIYMKRSGEKKRDGCGIFYKDELAELVLEEKIEYNDLVKTIPDGNSSNDDEHNNVKTTQLDKQKDVATNTGPKSGTEDRGDPNDPRVRLKRDCVGILAAFKFKGPPHQFLIVANTHIYWNPEWADVKLAQAKYLLSRLSQFKTLVSDRFECTPEVIVAGDFNSQPGDPVYQYLISGNPSSELITDCIEELPIPLSSVYASTRGEPPFTNYTPGFTGTLDYILCCPSDYMKPISYLELPDSEAADIAGGLPNLSHPSDHLPIGAEFEIVKE 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06114 391 MobiDBLite consensus disorder prediction 163 207 - -
Vifa1g06114 391 MobiDBLite consensus disorder prediction 166 180 - -
Vifa1g06114 391 Pfam Endonuclease/Exonuclease/phosphatase family 55 379 IPR005135 GO:0003824
Vifa1g06114 391 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 15 388 - -
Vifa1g06114 391 Gene3D Endonuclease/exonuclease/phosphatase 20 391 IPR036691 -
Vifa1g06114 391 MobiDBLite consensus disorder prediction 181 197 - -
Vifa1g06114 391 SUPERFAMILY DNase I-like 51 388 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06114 Vifa-Chr1 955136043 955139308 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06114 K12603 - tpra:123907543 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06114 1 955136043 955139308 Vifa1g06114 1 955136043 955139308 ECH