Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06106 ATGGTGAACGCTTCTATTGCTCGTAACATTGTTGGAATCATAGGGAATGTTATCTCCTTCGGATTGTTCTTCTCGCCAGCTCCGACTTTCTATAAAATTATAAAGAAGAAAGATGTGGAGGAGTTCAAGCCTGATCCGTATATAGCAACTGTGTTGAGTTGTGCGTTTTGGGTGTTCTATGGATTACCTTTTGTGCATCCAAATAGTCTTTTGCTTGTTACCGTCAATGGTGTTGGGCTTGTTTTCGAGTTTGTCTATCTCACCTTATTTTATATCTATTCCAACACCAAAGGAAGGAAGAAGTTGCTTCTTTATCTTCTCATTGTGGTTATTTTCTTTGTTATCATTGTTCTTATAACAATGTTGGCACTACATGGCACGACCACTCGATCCTTGGTGGTTGGTATTATTTGCGATATCTTTAATATACTGATGTATGTCTCTCCTCTTACCGTCATGGCAAAGGTTATCAAAACTAAGAGTGTTGAGTACATGCCATTTTGGCTCTCTTTGGCTAACTTCCTTAATGGATTGAGCTGGGCATCATATGCTCTCATTCACCCTCTTGACATTTATGTTCTGATCAGCAATGGAATTGGAGTAATTTCTGGACTTATTCAGCTTCTGTTATATGCTTATTTCTGGTGCAAGGGTGGAAAGAAAATTGATGAGGGTGATCATGTTCCAAAACCAACTATAGATGCAGTTTGA 711 0.3868 MVNASIARNIVGIIGNVISFGLFFSPAPTFYKIIKKKDVEEFKPDPYIATVLSCAFWVFYGLPFVHPNSLLLVTVNGVGLVFEFVYLTLFYIYSNTKGRKKLLLYLLIVVIFFVIIVLITMLALHGTTTRSLVVGIICDIFNILMYVSPLTVMAKVIKTKSVEYMPFWLSLANFLNGLSWASYALIHPLDIYVLISNGIGVISGLIQLLLYAYFWCKGGKKIDEGDHVPKPTIDAV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06106 236 Gene3D - 127 215 - -
Vifa1g06106 236 Gene3D - 6 100 - -
Vifa1g06106 236 FunFam Bidirectional sugar transporter SWEET 9 99 - -
Vifa1g06106 236 FunFam Bidirectional sugar transporter SWEET 130 224 - -
Vifa1g06106 236 Pfam Sugar efflux transporter for intercellular exchange 10 97 IPR004316 GO:0016020
Vifa1g06106 236 Pfam Sugar efflux transporter for intercellular exchange 133 214 IPR004316 GO:0016020
Vifa1g06106 236 PANTHER RAG1-ACTIVATING PROTEIN 1 17 218 IPR047664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06106 Vifa-Chr1 954574878 954587494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06106 1 199 Miscellaneous Gene Families AT5G62850 54.774 3.47e-77 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06106 K15382 - gmx:102666983 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06106 1 954574878 954587494 Vifa1g06106 1 954574878 954587494 ECH