Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06066 ATGGCAGAAGAAGAACACCACGACGAAATGAAGAAACTATTTTCGTCCTACATCGGTCTCAGCTTCTCCGTCTTCCTCGCCCTCCTTCCCAACAAACTCCGAGAACATTCTCTCAGAGCCTTTCGCGCCGAGGAAGAGCTACGCCAGATAAAATCCCGCCGCCAGGAGGATTACAAAGCAAACGCCAGAGTAGCCGAGATCTTCGCCTCGCACCGAAACTCCTGGCGCGACGAAGAGAAACGTCTCTTGCGTCGAATCGACGCCGCGTCGGAGGAGATCGATAGGCTGAGAGGAATCGTGGAAGATTCCAAGGCGCGTGTGGAGGAGTTGGAGCGTGAGGTTGTTGAGAGAGATGATATGATTGGGTTTATTTCCAGAAGGTTTCAGGAGGATGGATTAGGTGGTTGCGGGAGCAGGGAACGTTACGGTGGGAATCAATATAATAATAGTAATAGCGGTGGTGGCGGTGGTGGTGGGGAGTGGTTTCATAAAGAGGAAGATGAAATGGTGGGGACCACTGCTGATTCTCGTAAAGTTGATGTTATCTATCAACAACATCATAGTAATGCTTTTGATTCTGAGTTTATTGCTTCTTCTGGTTCTAAGTTTTGGGCTGAAAAAGCATCACTGTGCCAGGATGTACAGTATGAATCCCTTGAATCAATGTATAATACGAAGCAATTTGTAGCAAGAAGGGAGTCCCCGTGGAAGGTAGACGGCGATTCAGCTGGAGTTTCCTCTAAACTTAAATTACTTGAACAGGAATTATTAAATCTGGAGAAGATTAGTAAGGATGTCCCGTCGAAGGTGTCATCCTCAATAAAGAAGCAAGCAAAGAGATTTCAATCGCTTTCAGAAAAAATTGATGATTTATGCAGACGAATACAGGCTAGTGATCCATGTGAACCCTCCCTCGGTTCAGAATTTCGAACCCAAACTCAAACAGAGTTTTTACTAGAAGCATTCCGGCTTCAACAGGGTGCATCTGAAACTGGACAGAAACTAATGGCATTGCATACCGAAGTCGGGAAGACCCATTACAGGGACGAGTTAAGAGGCGAGACCACACTAACCACAAGACGATCGCTGGACTCTATTCGAAACAACTTCAGAGAACTCCAGCGAAATCTGGAGATCTGGTTGGCCAGAATCATCGGTGATCTCGAAGGAATTCTTGCAAGGGACGGTGCGTCTCGCGTAAGAGAATATTACATTTCTAGATATCCTTTTGTTCAATAG 1239 0.4617 MAEEEHHDEMKKLFSSYIGLSFSVFLALLPNKLREHSLRAFRAEEELRQIKSRRQEDYKANARVAEIFASHRNSWRDEEKRLLRRIDAASEEIDRLRGIVEDSKARVEELEREVVERDDMIGFISRRFQEDGLGGCGSRERYGGNQYNNSNSGGGGGGGEWFHKEEDEMVGTTADSRKVDVIYQQHHSNAFDSEFIASSGSKFWAEKASLCQDVQYESLESMYNTKQFVARRESPWKVDGDSAGVSSKLKLLEQELLNLEKISKDVPSKVSSSIKKQAKRFQSLSEKIDDLCRRIQASDPCEPSLGSEFRTQTQTEFLLEAFRLQQGASETGQKLMALHTEVGKTHYRDELRGETTLTTRRSLDSIRNNFRELQRNLEIWLARIIGDLEGILARDGASRVREYYISRYPFVQ 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06066 412 Coils Coil 274 294 - -
Vifa1g06066 412 Coils Coil 72 120 - -
Vifa1g06066 412 Coils Coil 363 383 - -
Vifa1g06066 412 Coils Coil 33 53 - -
Vifa1g06066 412 PANTHER RIBONUCLEASE P PROTEIN SUBUNIT P38-LIKE PROTEIN 4 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06066 Vifa-Chr1 947422902 947426831 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06066 - - mtr:11406342 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06066 1 947422902 947426831 Vifa1g06066 1 947422902 947426831 ECH