Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06034 ATGGAAGGGAGAGGATTTTCTGGTTTATACAAGAATTCAAGTGAAGAGTTGTTCTTGAAGACAGTGATGGAGAGTCCTATTGGTATGCCAGTACCTACCATGGATATGTTAGGATTTAAGACGATTTCTCAAAGCTTTCGAGCCGATAGTGAGGAGCTTTTCAAACGCTGGCTAACAAATGAAGAGGGATACAATTCAACGAGCATGGGACTTAACAGTCGATTATCGAAGAGAATCTCCACTGAACTAGTTAATGCGTCTAATCAGCAACGTGTCGGTGTTGCTTTGGATGGAAGAAACATTGATAAATCATGCTTACAAAATAGCTTTTTGGCAAATGATGTTTCGGGGGATTTCAATTTTCCAATCAGAGATCCTGTTGATAGAGAATTGCAATCTAGTAACTTGTTTCTGGCCAAGGCCTGGTTTCTTACCGATCAACGAATGACAAGAAGCCGGTCTTCTGAATTGCGGCGAAGGTATACCGAAATGCAAAATACTCAAGCACCACAAGGACTGGATTCAATGTTCATGGCTCCTAAGCATGACGCTAACATTATAAAAGAAGAACTTGCACATTTCAATGGTTTTGATTACCTTTCAATGTGTGAAATACCGAGTCAAAAGGGCTCATTCTTGTCTCCATCCAACTCATCTTCATCTACCTTCAACACACAACAATTGGTTGATGTAGATAAAGTTTCATCTTGTGTAAGTATGCTAAAAGGCACGTTACAACGCAAGAGACTCGAATGCCAAGTCGAGAAAGATGCTGCAGAAGACGGCTTAAACGAAATTTTTGGTATTCGAGAACCTCTTTTCCAATCTGGTTTTAATGAAGGACAAGAAAATTGGAATCATCACAAGCTAGTAAATGTTCAAGGAGATTTTACCGATCAAGGAGTCATTGAAACACTTGAAGGAGCCGCAAACTTCGTCTTAGAGGGTTTTGCGAATCAGACGAACCAAATACACGGTGGAACGGCTTCTGGAGAACCTTCGCAAAGTGAATCTTCTGCTGCTGCACCAGTAATCTCATCTGGTTTAGATGCTTGTGAAGGTCCTAGCAATTCAAGTCAAACTCTTTGTGATAGCTCATGGAAACAAGTGGGAGAAAGCACTCAAAATAGAGCCAAAGGTGTTAGAGAACAGATAATGGATAATCTGAAAGATGACAGAAAGAGGAAAAGACTAGAGAGATATGCATCTGTAACATCAGCTGTTTCAGATGACAAAGTGGACACGACAAAAAAGCGAAGGGTAGAGCGATCAAGAAAAATGGCTGAGGCAAAGGAAAGAAATTTGACACCAACAATTCCCTCAGATATGCAAGCTGTCATGAAGCGATGCGAAAACCTTGAGAAGGAAGTTCGATCGCTAAAGCTTAACTTGTCCTTCATGAATAGGAAGGATTCTGAACAAACAAAGCAGATAGAGGATCTTCAGAAGCAGAATGAAGAGTTAGCAGATGAAAAAGAGCGCCTACTCGAAGAGATTGAAAGACTTTTAGCAGAAACTGGAAAGATTTAA 1530 0.4046 MEGRGFSGLYKNSSEELFLKTVMESPIGMPVPTMDMLGFKTISQSFRADSEELFKRWLTNEEGYNSTSMGLNSRLSKRISTELVNASNQQRVGVALDGRNIDKSCLQNSFLANDVSGDFNFPIRDPVDRELQSSNLFLAKAWFLTDQRMTRSRSSELRRRYTEMQNTQAPQGLDSMFMAPKHDANIIKEELAHFNGFDYLSMCEIPSQKGSFLSPSNSSSSTFNTQQLVDVDKVSSCVSMLKGTLQRKRLECQVEKDAAEDGLNEIFGIREPLFQSGFNEGQENWNHHKLVNVQGDFTDQGVIETLEGAANFVLEGFANQTNQIHGGTASGEPSQSESSAAAPVISSGLDACEGPSNSSQTLCDSSWKQVGESTQNRAKGVREQIMDNLKDDRKRKRLERYASVTSAVSDDKVDTTKKRRVERSRKMAEAKERNLTPTIPSDMQAVMKRCENLEKEVRSLKLNLSFMNRKDSEQTKQIEDLQKQNEELADEKERLLEEIERLLAETGKI 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06034 509 MobiDBLite consensus disorder prediction 397 431 - -
Vifa1g06034 509 MobiDBLite consensus disorder prediction 323 343 - -
Vifa1g06034 509 PANTHER PROTEIN CYCLOPS 1 508 IPR040036 GO:0005634|GO:0036377|GO:0043565
Vifa1g06034 509 Coils Coil 443 505 - -
Vifa1g06034 509 MobiDBLite consensus disorder prediction 411 431 - -
Vifa1g06034 509 MobiDBLite consensus disorder prediction 323 360 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06034 - - gmx:100811742 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06034 1 944151459 944153921 Vifa1g06034 1 944151459 944153921 ECH