Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05992 ATGGTTTTATTATCCACTACTTCTACCATCATGTTCTCCTTTTCACCATTCGCACCCTCTTCCCTTCCAACTTCAACTGTTGTCAAGTTGGAAACTTTTTCCCTCAAAAATGATGGGTTTATCAGAATTAGAGGAGTTAATGCTGTTTCAAAGGTGCCCAGAAATCCTAAATTAGCTATATGTTGTTCTGTTTCGGCTTCGGGTGATGCTAGTGCCTCTCTTCAGACTCATGTTCCTTTCCCTTTTGATTATTCTGAACTTCTGGAACAAGCTGGAGTTGCTGTGGAATTGGCCATGAAGGATAACAAAAAGCTAATGGAAATTGAGTTTCCCACAGCCGGACTCACGTCTGTACCAGGTGATGGTGAAGGTGGAATAGAGATGACTGGAAGCATGCAATTGATTCGTGAATTTTGTGACCGCTTCATTTCGTCTGAGAAAACCACACGAACAAGAATATTTTTTCCAGAAGCTAATGAAGTCGACTTTGCAAGACAATCCGTCTTCAGTGGAGCTTCTTTTAAGCTGGACTATCTGACAAAGCCTTCATTCTTTGAAGATTTCGGTTTTGTTAAGAAAGTAAAAATGTCGGATAGAGTGAAGGAAGAAGATGAACTTTTCATCGCAGCCTATCCGTATTTCAATGTCAACGAAATGCTTGTTGTCGAAGAACTTTACAGAGAGGCTGTCTTGAATAGTGATCGGAAACTGATTATTTTTAATGGAGAACTCGATCGAATCAGATCTGGGTATTATCCACCGTTCTTTTACCCGAAGCTTGCTGAACTTACAAAGTCCTTTCTACCTGGGATGGAAACTGTGTACTACATTCATAATTTCAAGGGTCGTAACGGAGGAGTACTTTTCAGGTGCTATCCGGGTCCTTGGAAGATACTGAGAAGAGTGGGGAGTAGTAAATATGTTTGTGTACATCAGCAGGATACTATGCCATCCCTCAAGGAAGTTGCACTTGAGATTCTTCCAACAAATTGA 993 0.4089 MVLLSTTSTIMFSFSPFAPSSLPTSTVVKLETFSLKNDGFIRIRGVNAVSKVPRNPKLAICCSVSASGDASASLQTHVPFPFDYSELLEQAGVAVELAMKDNKKLMEIEFPTAGLTSVPGDGEGGIEMTGSMQLIREFCDRFISSEKTTRTRIFFPEANEVDFARQSVFSGASFKLDYLTKPSFFEDFGFVKKVKMSDRVKEEDELFIAAYPYFNVNEMLVVEELYREAVLNSDRKLIIFNGELDRIRSGYYPPFFYPKLAELTKSFLPGMETVYYIHNFKGRNGGVLFRCYPGPWKILRRVGSSKYVCVHQQDTMPSLKEVALEILPTN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05992 330 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 62 329 IPR044687 -
Vifa1g05992 330 Pfam Domain of unknown function (DUF1995) 81 323 IPR018962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05992 Vifa-Chr1 938231460 938233630 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05992 - - psat:127119829 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05992 1 938231460 938233630 Vifa1g05992 1 938231460 938233630 ECH