Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05989 ATGGAAAAGAGCAAGGTTCTAGTTGTGGGGGGTACTGGCTATATTGGTAGGAAAATAGTAAAAGCAAGTTTAGAACAAGGTCATGAAACCTATGTTCTTCAACGTCCAGATATAGGACTTGATACTGAGAAAGTGCAAATGCTTCTATCATTCAAGAAACAAGGTGCTCATCTTGTTGAAGGTTCTTTTGCTGATCATCAGAGTCTGGTAGATGCTGTGAAACTAGTTGATGTTGTTATTTGCACTATATCTGGTGTTCACTTTCGATCACATAATTTGATGATGCAACTCAAACTTGTTGAGGCTATCAAGGATGCTGGAAATGTTAAGCGTTTCATACCTTCAGAATTTGGGATGGACCCAGCTCGCATGGGACATGCACTTGAACCAGGAAGAGCCACATTTGATGAGAAAATGACTATAAGACAAGCAATTGAAGATGCCAACATCCCTCACACTTACATCTCCGCCAACTGCTTCGCTGCCTACATGGCCGGCAACCTCTCTCAGATGGGGACACTCTTTCCTCCGCGGAACAAGGTGGTTCTCTATGGCAACGGTAATGTCAAAGTTGTTTATGTTGATGAAGAAGATGTTGGAACATACACAATTAAGACAATTGATGATCCTAGAACACTGAACAAGACAATATATCTAAGGCCACCAGAAAACATACTCACTCAAAGAGAGCTAATTCAGGAATGGGAGAAACTTATTGGAAAGCAACTAGAGATATCTCCTATATCTCAACATGACTTTCTTTCTTCAATGAAAGGTGTGGACTTTGCAAGCCAAGCAGGAATGGGACATTTCTATCATATTTTTTATGAAGGGTGTTTGACAAATTTTGAAGTAGGGGACGAAGAAGAAGCATCAAAGCTTTACCCAGAAGTGCAATACACACACATGGATGAATTTCTAAAATTATATGTCTGA 936 0.4006 MEKSKVLVVGGTGYIGRKIVKASLEQGHETYVLQRPDIGLDTEKVQMLLSFKKQGAHLVEGSFADHQSLVDAVKLVDVVICTISGVHFRSHNLMMQLKLVEAIKDAGNVKRFIPSEFGMDPARMGHALEPGRATFDEKMTIRQAIEDANIPHTYISANCFAAYMAGNLSQMGTLFPPRNKVVLYGNGNVKVVYVDEEDVGTYTIKTIDDPRTLNKTIYLRPPENILTQRELIQEWEKLIGKQLEISPISQHDFLSSMKGVDFASQAGMGHFYHIFYEGCLTNFEVGDEEEASKLYPEVQYTHMDEFLKLYV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05989 311 CDD PCBER_SDR_a 5 306 IPR045312 GO:0016491
Vifa1g05989 311 PANTHER PINORESINOL REDUCTASE-RELATED 1 310 - -
Vifa1g05989 311 Gene3D - 4 296 - -
Vifa1g05989 311 Gene3D - 158 307 - -
Vifa1g05989 311 Pfam NmrA-like family 6 260 IPR008030 -
Vifa1g05989 311 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 270 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05989 Vifa-Chr1 937552977 937555263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05989 K21568 - gmx:100775382 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05989 1 937552977 937555263 Vifa1g05989 1 937552977 937555263 ECH