LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa1g05961	ATGAACAACTGCGACGCAATCTTAATCGACGATTGGGACGACGACATACTCGACGAATTAATCCGAGTCGAATCCACCATCCCTTCAAAACCCAAAACCCTCTCCACAGACCCTTCTTCATTCTCCAACCATCATCACCAACCCCAACAACAACAACAACAACAACAACAACAAGTTCAATTACCACTAGCTTCCGAACGTTCTGTTAACTTCTCACCTCCTCGAGAGCTTTCTCAAAAACCCACTACTTCCGTTTTCGAATCTTCCCTTCCTAAACCACTTTTCGATGATATGTACATCGAAATTGATCAATTTAAGCAAAAACAGAGGGAGCCAGGACGTCCTTCCAAGCAGATTCCAAATACGGATAAGGAGTGCTCCAAGTTAAAGAAAGAAAGAGACAAGAAAGATGTTCATTCCATACCCGTGTCTTCAGAGAACGAAAAAGATAATGTCCGCACTAAATGTGTGAAAAGCATAGACAATGGCAGGAATATCGAAATTCGTGCTCCCGACCATCCTAAAGCCTCTTCAAAATTTCATAATGAAGGATCTTCAAATGGTCAAACTGTTGATACAACTGCTAAAGCTAAAGAGGTAAAAACGGCAATAGCTAGTCATCAAGAAGCTCAAGATCATCCAAGTGATGCTCTTTCTTCTTTCCCAGAAGCTAAAAGGGTCGAGACAACTGGTAAACCTAAAGGGGTTGAAACAAAAATAGTTAGTCGTCAAGAAGTTCAAGATCCTCCAAGTGATGATCTTTCTTATCTTGACCTCTCCCAGAAGTTGCTTGCAGTATGGAGGTCTCCAAGTGAAAAATTGCTTGGAAGTGATGTTATATCGAAGTTGTTTGCCAGTTGTCAAAAAGATATTCATATTCTTTTTGGTAACATGAGCACGAGTTCGCCTGAAATAACACGAAAATTACATACAGATGTAAGCTCTTCAAAAGTATCTTCGCATTACGTCAATGGTTGTTTCCATACTCCCGAAGCAACAAAGGTGTCACATCTCTACCATGCATTGACAAAGGTAGCTGATGGAACAGATGTGTTGGAAACTTTGATAGCACCATTGCTTGATCTATGTAGTATGGAAAATTGCACTCTGCTCAGGGATAATGTCTTCATTGATGGAATATGCGTTGGGAATGACCTTTTGGATTCTGGTGGGTTGGACGGTGTGAAAGATCAAAAGCCCTTCAATGAAGAAATGTTTAGAAAAGAGTGCTGGAACTATCAGAGTGCCTTAAAACCTCATGTGAATTGGTCTAGTATTTTTGACATTTTGCACCAAATTTCCATGAGGATCACAGAAGAAAATGTGAGAGAGGAGGCAGTGTCCATTATGCTATTACTTTTCCTAAGGAGTACTGCTTACTTTGAGAGGGAGCAGTTTAGCCAGAACACAGTTTTTAAAACTATTTCGGAATTGCTTAAGAAGGATGCTGGGCTACGCGTAAAAAAGAAAACTTTGCGACTTCTGTACCTAGTATTAAATTGTCCAAAACTGTTGGCCACTTTCTGCTGTGGTTGCAAAGAGGAGGACAGTAGTAGCGCTGTGGATGACAACGCATCTGTGTCAAATTTCCAAAATTTTAACATCATTCTTCGAGGATTGGCCGATTGTGTTGCTTCCCATGGAGGTGGTTTAGTGGAGTTGAAAATAAGCAGAGAGGCTATTATGGTGCTAGCGTTCCTTGCATCATCGGGCCAATCTGGTTTTGAAATCTTTATTGCTCACAGGCTCTCTACAAGAGGTGTAAACTATCTTATGTCGATTTTGCAATTACTGGTATCAGAGATGGACTGTGAAGCTGGATCCCACAATGAACTGCCAGAAATTTTTAGGGAGAGGACATTTCTTATGCGGGATATACTGATATTGCTTAATAGACTAGTATCAAGTCCATCATATTCTGCCACAGTTTTGCGCGATTTAACAGACACCAGGGATATGGCTAGTTTAACAGTCGATGTTGCAACCAGATTGTCACGGAAAGGAAATGAAAGTGAGCAGCAGGAAGACAGCATGGTGAAGCAAGTAAGACGAAATGAAATTGTTGACCTTGCTCGCCTATTCAAGAAAAGGGTATTCACGTAA	2103	0.4089	MNNCDAILIDDWDDDILDELIRVESTIPSKPKTLSTDPSSFSNHHHQPQQQQQQQQQQVQLPLASERSVNFSPPRELSQKPTTSVFESSLPKPLFDDMYIEIDQFKQKQREPGRPSKQIPNTDKECSKLKKERDKKDVHSIPVSSENEKDNVRTKCVKSIDNGRNIEIRAPDHPKASSKFHNEGSSNGQTVDTTAKAKEVKTAIASHQEAQDHPSDALSSFPEAKRVETTGKPKGVETKIVSRQEVQDPPSDDLSYLDLSQKLLAVWRSPSEKLLGSDVISKLFASCQKDIHILFGNMSTSSPEITRKLHTDVSSSKVSSHYVNGCFHTPEATKVSHLYHALTKVADGTDVLETLIAPLLDLCSMENCTLLRDNVFIDGICVGNDLLDSGGLDGVKDQKPFNEEMFRKECWNYQSALKPHVNWSSIFDILHQISMRITEENVREEAVSIMLLLFLRSTAYFEREQFSQNTVFKTISELLKKDAGLRVKKKTLRLLYLVLNCPKLLATFCCGCKEEDSSSAVDDNASVSNFQNFNIILRGLADCVASHGGGLVELKISREAIMVLAFLASSGQSGFEIFIAHRLSTRGVNYLMSILQLLVSEMDCEAGSHNELPEIFRERTFLMRDILILLNRLVSSPSYSATVLRDLTDTRDMASLTVDVATRLSRKGNESEQQEDSMVKQVRRNEIVDLARLFKKRVFT	700

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa1g05961	700	MobiDBLite	consensus disorder prediction	226	252	-	-
	Vifa1g05961	700	MobiDBLite	consensus disorder prediction	28	89	-	-
	Vifa1g05961	700	MobiDBLite	consensus disorder prediction	24	89	-	-
	Vifa1g05961	700	MobiDBLite	consensus disorder prediction	105	154	-	-
	Vifa1g05961	700	MobiDBLite	consensus disorder prediction	227	241	-	-
	Vifa1g05961	700	MobiDBLite	consensus disorder prediction	168	191	-	-
	Vifa1g05961	700	PANTHER	ATR INTERACTING PROTEIN	8	700	IPR044952	GO:0006974

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa1g05961	Vifa-Chr1	932931630	932943366	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa1g05961	-		-	psat:127119810	1102.04

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa1g05961	1	932931630	932943366	Vifa1g05961	1	932931630	932943366	ECH