Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05920 ATGGGGTGCATGGTGTCTCAGTTAGCTTCAAAGTTTGCTTTTTTCCCACCTTCACCGCCAACTTATCAGCTCAAAAACCGTGACGACGGTAAGCTCACGGTGGTTTCCACGGCGTCTCCGATTCCTCACCCTGATGATAACTCATTGGATGTTCTTCTTGTTGACACCAAACATGGAAATAAGATAGTTGCTTTTTATCTTAAGAACCCTTATGCAAGATTAACTCTACTTTACTCTCATGGCAATGCTGCTGATTTGGGTCAACTCTATGATCTCTTTGTTCAACTCAAAGTTAATCTTAGAGTTAATCTCATGGGATATGACTACTCTGGATATGGAGCCTCTACCGGCAAGCCTAGTGAATCCAGCACATATGCTGACATAGAGGCGATATACGAATGCCTTGAAACCGAATATGGCGTTAGTCAAGAAGACGTGATTTTATATGGGCAATCAGTTGGAAGTGGACCGACATTGCATTTGGCAGCTAAATTGCCTAGGCTGAGAGGCGTTGTTCTACACAGCGGCATTCTTTCTGGTCTCCGAGTTCTCTGTCATGTGAAATTCTCTTTTTGCTTTGACATTTATAAGAATATCAACAAAATAAAGAAGGTCAAGTGTCCTGTACTAGTCATCCATGGTACAGAAGACGACGTGGTCAATTGGTTACATGGTAACCGACTATGGAAAATGGCAAGCGAGTCATACGAACCGTTGTGGATTAAAGGAGGCGGTCACTGCAACTTGGAGCTTTACCCTGATTACATACGCCACCTATGCAAATATATCCAAGAAATGGAGAACATGACAACCGAAAAGCGCCTCAAAAAGATCCGACAAAATCTAGACTCACAGTCAAAATCAAACGCATGTTCCGCATGTACATGCCGTGGAATCAAGTGTTGCTGTAGCTTCAAATGCAAGTTACCTAAATGCTCTGACTGCTGCAGCTGCATAAATTTCTCCTTGTCTATCAACTGTCCTGATTGTTGCTGTAAACCAAACTGCTTCAAGTGCTGTCGCTTACCGAAACTAACAAATTGTTTCGGCTCATCATGCTGCACAATATGCTCAAGGCCTAGTTGCTGTAGTTTAAAATGTTCATTGCCTTGTTGCTATCCTAATTGCGGAAGACCAAGTTGTTGCATGAGTTGTTTCTGTTGGCAATGTCTTATGGGAAAACACAATGGAAGAAATGGAAAACAAAGAGGCTAA 1215 0.4239 MGCMVSQLASKFAFFPPSPPTYQLKNRDDGKLTVVSTASPIPHPDDNSLDVLLVDTKHGNKIVAFYLKNPYARLTLLYSHGNAADLGQLYDLFVQLKVNLRVNLMGYDYSGYGASTGKPSESSTYADIEAIYECLETEYGVSQEDVILYGQSVGSGPTLHLAAKLPRLRGVVLHSGILSGLRVLCHVKFSFCFDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNRLWKMASESYEPLWIKGGGHCNLELYPDYIRHLCKYIQEMENMTTEKRLKKIRQNLDSQSKSNACSACTCRGIKCCCSFKCKLPKCSDCCSCINFSLSINCPDCCCKPNCFKCCRLPKLTNCFGSSCCTICSRPSCCSLKCSLPCCYPNCGRPSCCMSCFCWQCLMGKHNGRNGKQRG 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05920 404 Gene3D alpha/beta hydrolase 48 260 IPR029058 -
Vifa1g05920 404 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 5 268 - -
Vifa1g05920 404 SUPERFAMILY alpha/beta-Hydrolases 35 266 IPR029058 -
Vifa1g05920 404 Pfam Phospholipase/Carboxylesterase 136 235 IPR003140 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05920 Vifa-Chr1 928426798 928430165 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05920 K01076 - gmx:100814433 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05920 1 928426798 928430165 Vifa1g05920 1 928426798 928430165 ECH