Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05913 ATGACCGATTCTTTCGCTCACTACGCGTCACACATTAATTACCGCCCCAAAACCAAAACTATGCTTATCTTCTCCACTCCGTGTTGCTCTCCTTCAACCGCATTTTTCTCACCTTTTAGGGCTTCAAATTGTAAACCTCTTCGTTCTTCTACACTCTGTCTTCGATCTTTAACTTCTTCTGCTACTTCTATAACTTCCACTTCTAACTCTTCTCTCGCTTTCAACATTGTTAAACCTAAAGAGAAAAACGTTGTTTCCGCTAATATGACTTCTTCTGTTTCGTCTCGCACTTTTCTCAATGCTCAAAATGAACAAGACGTTCTTTCTGGGATTAAGAAAGAAGTAGAAGCGGGAACTTTGCCTGCCAGTATTGCTGCAGGGATGCAAGAAGTGTACCTTAACTACAAAAGTGCAGTTATTAAAAGTGGAGATCCCAAAGCAAATGAAATTGTATTGTCAAATATGACTGCCTTATTAGATCGCATATTTTTGGATGTGAAGGAGCCTTTTGTCTTTGAAGCACACCACAAAGCAAAGAGAGAGCCTTTTGACTATTACATGTTTGGTCAAAATTATATTCGCCCCTTAGTTGATTTCGAAACTTCTTATGTCGGTAACATGCCCCTTTTTATTCAAATGGAAGAGCAACTTAAGCAGGGGCACAATATTATCTTGATGTCAAACCACCAAAGTGAAGCAGATCCGGCTATTATTGCATTGCTGCTTGAAATGCAACTTCCACATATTGCTGAGAACTTGATATATGTAGCAGGAGATAGAGTTATAACAGATCCTCTGTGCAAGCCCTTCAGTATTGGCAGGAATCTGATATGTGTTTATTCGAAAAAGCACATGCTTGATAATCCAGAACTTATAGATATGAAAAGAAAAGCAAATACAAGAAGTCTGAAGGAAATGGCAACACTTTTAAGGAGTGGATCACAGATAATTTGGATTGCCCCAAGCGGCGGTAGGGATCGACCAGTTGCCAACTCTGGGGAATGGGCACCGGCACCCTTTGATTCTTCTTCAGTGGATAATATGCGAAGGCTTGTTGATCATTCAGGTCCACCAGGTCATATCTATCCTTTGGCAATATTGTGCCATGACATAATGCCCCCTCCACTAAAGGTCGAAAAAGAAATTGGGGAGAAAAGAATTATATCCTATCATGGGACTGGCATATCAACTGCTCCAGAAATAAGCTTTTCCAGTACCACTGCTGCTTGTGAAAATCCTGAAACGGCTAAGGATGCTTATACAAAAGCCTTGTATGATTCTGTGACTGAGCAATATGATGTGCTGAAGTCTGCTATACACGGTAAAAAAGGATTGCAAGCATCAACTCCTGTAGTTTCTTTGTCGCAGCCATGGAAGTAG 1380 0.4058 MTDSFAHYASHINYRPKTKTMLIFSTPCCSPSTAFFSPFRASNCKPLRSSTLCLRSLTSSATSITSTSNSSLAFNIVKPKEKNVVSANMTSSVSSRTFLNAQNEQDVLSGIKKEVEAGTLPASIAAGMQEVYLNYKSAVIKSGDPKANEIVLSNMTALLDRIFLDVKEPFVFEAHHKAKREPFDYYMFGQNYIRPLVDFETSYVGNMPLFIQMEEQLKQGHNIILMSNHQSEADPAIIALLLEMQLPHIAENLIYVAGDRVITDPLCKPFSIGRNLICVYSKKHMLDNPELIDMKRKANTRSLKEMATLLRSGSQIIWIAPSGGRDRPVANSGEWAPAPFDSSSVDNMRRLVDHSGPPGHIYPLAILCHDIMPPPLKVEKEIGEKRIISYHGTGISTAPEISFSSTTAACENPETAKDAYTKALYDSVTEQYDVLKSAIHGKKGLQASTPVVSLSQPWK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05913 459 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 44 459 IPR016222 GO:0004366|GO:0006650
Vifa1g05913 459 Gene3D - 169 450 - -
Vifa1g05913 459 Pfam Glycerol-3-phosphate acyltransferase N-terminal 95 170 IPR023083 GO:0004366
Vifa1g05913 459 Pfam Acyltransferase 212 366 IPR002123 GO:0016746
Vifa1g05913 459 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 95 458 - -
Vifa1g05913 459 SMART plsc_2 223 369 IPR002123 GO:0016746
Vifa1g05913 459 CDD LPLAT_GPAT 200 435 - -
Vifa1g05913 459 PIRSF G3POAT 4 459 IPR016222 GO:0004366|GO:0006650
Vifa1g05913 459 Gene3D - 93 168 IPR038114 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g05913 46 458 Acyl Lipid Metabolism Gene Families AT1G32200 63.527 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05913 K00630 - ag:CAA41769 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05913 1 926491452 926497993 Vifa1g05913 1 926491452 926497993 ECH