Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05786 ATGGAGAAAGCAGAGAGCTCCACCGCCACCGCCTCCACCTCCGACCAAGACTCCGACGAAAAGCACCGCACACACCACCACCTAACACTTCCACCAGGTCTAACTCACCATGAGTTCGACTCACTCATCTCCTTCGTCACCGACCACCACACTTACCTCATCGGTCCCGGCCAATGCTCCACCTTACTCGCTCAACGAATCCACGCGCCTCCCGAAACCGTCTGGTCCGTCGTCCGCAGCTTCGACAAACCGCAAATCTACAAACACTTCATCAAAAGCTGCTCTCTCAAAGACGGCTTCCAAATGAAAGTCGGTTGCACCAGAGACGTCAATGTCATCTCCGGTCTCCCGGCGGAAACCAGCACCGAGAGACTCGACGTTCTCGATGACGAACGCCGCGTCACCGGATTCAGTATCACCGGCGGAGAACACCGGTTGAGAAACTACCGTTCTGTTACCTCCGTTCACGGCTTTGATGACGGTGACGGCGAGATCCGGACGGTTGTTCTTGAATCTTATATAGTTGATGTGCCGGAAGGTAACACCGAAGAGGATACGCGTCTTTTTGCTGATACCGTTGTGAAGCTTAATCTTCAGAAGCTGGCGTCTGTCACCGAAGGAAAGAACCGTAACGGTGACGGTAAGTCACATTAG 654 0.5382 MEKAESSTATASTSDQDSDEKHRTHHHLTLPPGLTHHEFDSLISFVTDHHTYLIGPGQCSTLLAQRIHAPPETVWSVVRSFDKPQIYKHFIKSCSLKDGFQMKVGCTRDVNVISGLPAETSTERLDVLDDERRVTGFSITGGEHRLRNYRSVTSVHGFDDGDGEIRTVVLESYIVDVPEGNTEEDTRLFADTVVKLNLQKLASVTEGKNRNGDGKSH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05786 217 SUPERFAMILY Bet v1-like 59 204 - -
Vifa1g05786 217 Pfam Polyketide cyclase / dehydrase and lipid transport 65 205 IPR019587 -
Vifa1g05786 217 FunFam Abscisic acid receptor PYR1 22 214 - -
Vifa1g05786 217 PANTHER - 63 203 - -
Vifa1g05786 217 MobiDBLite consensus disorder prediction 1 32 - -
Vifa1g05786 217 MobiDBLite consensus disorder prediction 15 32 - -
Vifa1g05786 217 Gene3D - 17 216 IPR023393 -
Vifa1g05786 217 CDD PYR_PYL_RCAR_like 59 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05786 Vifa-Chr1 901923826 901924479 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05786 K14496 - qsu:112029640 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05786 1 901923826 901924479 Vifa1g05786 1 901923826 901924479 ECH