Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05292 ATGAAACTCAACAGCATTTCATTTTTGTCCAAGCTTCTCATACTTCAATATCTGTCACTTCAATGCCTTTCTGCTCAAGATTTTGCTTTCTTCTATTTTATTCAGCAGTGGCCAGGTTCATACTGTGACACAAAGCATAGCTGCTGTTATCCGAAAACCGGAAAACCTATTGCAGATTTCACCATTTATGGACTTAGACCTAACTACAATGATGCATCATTTCCCTCAAACTGTGATCCTCATAGTATCTTTGATAAATCTAAGATCTCAGACCTCATTAAGAACTTGGAAAAGAATTGGCCATCTCTGAGCTGTCCAAGTAGCAATGGTATTAGATTATGGTCACATGAATGGATGCAACATGGTACATGTTCAGAATCTAAGCTTATTCAACATGACTACTTTGAAACAGCTCTCAAACTCAAGAAAAAACTTAACCTACTTCAGATCCTCAAGAATGCAGGGATTGAACCAAATGATAAATTTTACGACCAATATAGCTTTTTAGATGCTATACAACAAGCTACAGGGTTTCTACCAGGAGTAGAATGTAATACAGATTCATCACATAACAGTCAGCTTTTGAAAGTTTACATGTGTGTGGATACTTCTGGCTCAAAGTTCATTGAGTGCCCTGGTGTTCCAATGGGTAGCTGTGGTGCTAAAGTACAATTCCCTAAGTTTTAA 687 0.3741 MKLNSISFLSKLLILQYLSLQCLSAQDFAFFYFIQQWPGSYCDTKHSCCYPKTGKPIADFTIYGLRPNYNDASFPSNCDPHSIFDKSKISDLIKNLEKNWPSLSCPSSNGIRLWSHEWMQHGTCSESKLIQHDYFETALKLKKKLNLLQILKNAGIEPNDKFYDQYSFLDAIQQATGFLPGVECNTDSSHNSQLLKVYMCVDTSGSKFIECPGVPMGSCGAKVQFPKF 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05292 228 Pfam Ribonuclease T2 family 28 211 IPR001568 GO:0003723|GO:0033897
Vifa1g05292 228 SUPERFAMILY Ribonuclease Rh-like 22 227 IPR036430 GO:0003723|GO:0033897
Vifa1g05292 228 CDD RNase_T2_euk 28 222 IPR033697 -
Vifa1g05292 228 FunFam Ribonuclease 3 22 228 - -
Vifa1g05292 228 Gene3D - 22 228 IPR036430 GO:0003723|GO:0033897
Vifa1g05292 228 PANTHER RIBONUCLEASE T2 21 216 IPR001568 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05292 Vifa-Chr1 824144316 824145283 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05292 K01166 - gmx:100778239 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05292 1 824144316 824145283 Vifa1g05292 1 824144316 824145283 ECH