Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05266 ATGAAAGGAAACATGTCTTTTGCTTTTGGTTCTACCAGGGTTTTCATCAGCAATTATGTGTTCTATTTGTTTGGATTGATACTCAAATACTTCTTCAGGTTTCTTAATTTAGGAGATGCAAAAAAAGATCTTATTGATTCACCATCATATGTAAATTTTCATGATTCTACTAAGATTGATGGTTTCTCAGAGGAGCTGGCAAATTTCCTATTTTGGAGTGAGGATTTTCATCAAGGAGAAACAGATTGCTCTGTTTTTACGGATCATGTTCATGATGAAAAAACAGAGTACTCTGTTTTAAAGGAGATTCACTATGGTTTTCATGAAGGTTGTGTGAAAACAGAGGTGTACAGGGATAACTCTGTTTTGAAGGAGATTGAAGATGGGTTAGAGAGAATTGAGAGTGAAATAGAAGATGAAATTTTCATGGAGAGTGAGTCTTCAAACTTTGTTGTTCATGAAGATGATAAGGAAAATGGAGGGGAAGATGAAGGTTTTGGTTCCATGGAGAGTAGTTCCAATGATCAAGAAATTGAACATGGTCTTCATAATGATTATATGAAGTTAGAAGAAGAGAAAGAAGAAGAAATAGGAGGAAATTCTCTTGTAGAGATTGACCATGATGTTGATGAAAATGGAAGAAAAATTGAAGAAATTGAAACAGAGTACTCTGTTTTCTCTGATGTTATTGAAGATGGTAACAAAATAGATGAAAAAGATTTAGAGGTTGTGAAAGATGATGAGTTTGAGATTCATCATGTTAATGATAAAATTGATGAAATTGAATCAGAGTTATCGATTTTTGGTGACGAGGGTTTCGATGTTGATGGTGATAGTAAAATGGAAGAAGAAACAGAACAAAGAACAGAGGAATCTGTTTTGGTGGAGAGTGAGACAAAAACAATAACCACAAGTAAGTATGAATTCTCATCAGAAAAAGATATAAGTGGATTTGTAGAAGAACCAATGACATTTCAATTTAGTTTTCGAGAGTTTTTCGTGAGTCCGAATATTTCATCCATTTCCAATAATGTGCACAAGGAGTTTTCAAACATTGATTCAGAAAAAGACATTGTAACTGAAAAACAAGAGTCTATTCATTCAACCGATAATCAGCTTCTTGGTGGAATTGATTCATCTGATGAAGATTATTTCATTTTCAATGAAAGTTCAGTGACATCAGATTCAGAGTCAGAATCATCTAGCTTAAGTGGTTTGATTTGGAGCAATAGCAACATCAACAAAATTGATGATTCATTTTCCTATCACTTTCTTGGTAGCGAAAATGGTAGCGAAAAATTTGAGTCGGAGATTCTAAAATTGATGATGAGAGATGAAAGAAAGGAAGAACATGGTTTTGAAGTGAAAGATGAACAAGAAGGTATGAAGAAAAGTAAAGAAGCTAAGTTTGAAGAAGAATTGAATCAATCTGAATCCGAATCTGATGAAGATGATTTTGAATGGGAGCATGAAGATATAGTGGAGCAATTGAAGTTAGAATTGAAGAATTCTAGACAAGGTGGACTTGCCACAATCATAGAAGAAGTTGAAGATGAAGATGAACAAGAACAAGAAGCAAAGGAATCACCAAAAGTGGTTCAAGAATTGAAACCAATGAAAATTGAAGTGAAGTTACTTGAATACAAGGATCAAATGAATGAGATTGAAAAAGTTCACAACAACTATGTAGAGAAAATGAGGAAGCTTGATATCTTGAATTACCAAACCATGCATGCATTAGGCCTTCTTCAACTAAAAGACCCTCTTAAGTTAATTTCAATACCAAAATCCACCATCTCACAAAATTTATGGCCAAGAAAATCAACAAAGATCACATCTGACCCATTTTTGAAACTTGTTCATCAACTTCATAGAGATTTGGAATTGGTGTATGTTGGACAAGCTTGTCTCTCATGGGAAATTCTATGTTGGCAACACATGAAAGCTATTGAGTTACAACAATATGATTCACAAGGGCCTCATAGGCATAGGTATAACCATGTTGCTGGCGAATTTCAACTTTTTCAAGTATTGATGCAAAGGTTCATAGAGAATGAACCATTTCAAAGTGGATCAAGGGTACAAAATTATGTCAAAAACCGCTGTGTAATTAGAAACTTGCTTCATGTTCCAGATATAAAAGATGATAGTAAAGGGGGCGAGGAAGATCCTATTGCAAGTGGAAAGTTGGAAGATATCATAAAGGAATCAATGCGAGTGTTTTGGGAATTTGTTCGAGCAGATAAAGATAATGGAAATGTGAATGTGATTTCAAAGCATATTGGAAGTGATCTCAAAGACCCTTCAATTTCAAATCTTCTAATGGACATTAGAACACAACTACAAAAGAAGGATAAAAAGCTGAAAGACATAATAAGAACCGGAAATTGCATAGTGAAGAAGTTCCAAAAGCACCATGAGGATCAACTTGATCATGAGCAACTAGTTGCACAAGTTGGGTTGAGATTGATTTCAAGGGTGATAAACATGTCACAATTGAGAAAAGAACAAGTGTTATGGTGTAGTGAAAAGTTGAACCGAATCAAATTTTTAAGCAAGAAGATTGTTCATGTTGAACCTTCTTTTTTGCTTTTTCCATGTTGA 2604 0.3414 MKGNMSFAFGSTRVFISNYVFYLFGLILKYFFRFLNLGDAKKDLIDSPSYVNFHDSTKIDGFSEELANFLFWSEDFHQGETDCSVFTDHVHDEKTEYSVLKEIHYGFHEGCVKTEVYRDNSVLKEIEDGLERIESEIEDEIFMESESSNFVVHEDDKENGGEDEGFGSMESSSNDQEIEHGLHNDYMKLEEEKEEEIGGNSLVEIDHDVDENGRKIEEIETEYSVFSDVIEDGNKIDEKDLEVVKDDEFEIHHVNDKIDEIESELSIFGDEGFDVDGDSKMEEETEQRTEESVLVESETKTITTSKYEFSSEKDISGFVEEPMTFQFSFREFFVSPNISSISNNVHKEFSNIDSEKDIVTEKQESIHSTDNQLLGGIDSSDEDYFIFNESSVTSDSESESSSLSGLIWSNSNINKIDDSFSYHFLGSENGSEKFESEILKLMMRDERKEEHGFEVKDEQEGMKKSKEAKFEEELNQSESESDEDDFEWEHEDIVEQLKLELKNSRQGGLATIIEEVEDEDEQEQEAKESPKVVQELKPMKIEVKLLEYKDQMNEIEKVHNNYVEKMRKLDILNYQTMHALGLLQLKDPLKLISIPKSTISQNLWPRKSTKITSDPFLKLVHQLHRDLELVYVGQACLSWEILCWQHMKAIELQQYDSQGPHRHRYNHVAGEFQLFQVLMQRFIENEPFQSGSRVQNYVKNRCVIRNLLHVPDIKDDSKGGEEDPIASGKLEDIIKESMRVFWEFVRADKDNGNVNVISKHIGSDLKDPSISNLLMDIRTQLQKKDKKLKDIIRTGNCIVKKFQKHHEDQLDHEQLVAQVGLRLISRVINMSQLRKEQVLWCSEKLNRIKFLSKKIVHVEPSFLLFPC 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05266 867 MobiDBLite consensus disorder prediction 156 175 - -
Vifa1g05266 867 PANTHER OS09G0413600 PROTEIN 280 867 - -
Vifa1g05266 867 Pfam Protein of unknown function (DUF1666) 625 866 IPR012870 -
Vifa1g05266 867 Coils Coil 509 529 - -
Vifa1g05266 867 MobiDBLite consensus disorder prediction 450 487 - -
Vifa1g05266 867 Coils Coil 545 565 - -
Vifa1g05266 867 MobiDBLite consensus disorder prediction 450 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05266 Vifa-Chr1 820114250 820118118 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05266 - - psat:127119520 1348.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05266 1 820114250 820118118 Vifa1g05266 1 820114250 820118118 ECH