Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05193 ATGGGTGCTTCCGGCAACAATCTTCTCCAAGTTGTTCTCAAAAACTTCGATGTTCTTTCTCTGCCTTTGGTGACCCTTGTTTATCCTCTATATGCTTCAATCAAGGCCATTGAGACAAAGTCTAGTGTTGATGACCAACAATGGCTCACATATTGGGTTCTCTACTCTTTGATCACACTCTTCGAGCTTACATTTGCCAAAGCTCTTGAACTGCTTCCAATTTGGCCTTATGCAAAGTTGATACTAAGTTGTTGGTTGGTTCTTCCTCACTTTAATGGAGCAGCACATGTTTATAGACATTATCTTAGACCATTCTACATGAATCCACAAATGCCACAAATGCCGCAAATACCAGGAACTTCCCAAATGTGGTATGTTCCGCGGAAGAACATATTTAGTAAACAAGACGATGTTCTTACTGCTGCAGAGAGATATATGCAAGAACACGGAACTGAAGCATTTGAAAGACTCATTACCAAGACTGACAGAGAAGCTAGAGCAAGGAGGAATGGAAACTACATGATCTTTGACGATGACTATAGATATTAG 549 0.4044 MGASGNNLLQVVLKNFDVLSLPLVTLVYPLYASIKAIETKSSVDDQQWLTYWVLYSLITLFELTFAKALELLPIWPYAKLILSCWLVLPHFNGAAHVYRHYLRPFYMNPQMPQMPQIPGTSQMWYVPRKNIFSKQDDVLTAAERYMQEHGTEAFERLITKTDREARARRNGNYMIFDDDYRY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05193 182 PANTHER HVA22-LIKE PROTEINS 22 149 IPR004345 -
Vifa1g05193 182 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05193 Vifa-Chr1 809826649 809840450 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g05193 K17279 - gmx:100306464 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05193 1 809826649 809840450 Vifa1g05193 1 809826649 809840450 ECH