Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa1g05044 | ATGGGTTCTTGTTCTTCAATTCAAAGAAAACCCAACACGGATAACAATAACATGAAGCTGAAAGTTTCATTTTTTGGATCCAAAACTGAGAACCTTGTGATTCCTTCATCACCCATTAAGGAACAAACCAAAAATGGTGACTTTAAGAAGTCACCTTCTAAGTCAACGACCAATTTCATTAACTATGGTAGTAAAGAGGAAACATTTTTTGATTCCAAACCTTGGATTGATTCAGATTGTGAAGATGATTTCTATAGTGTCAATGGTGGAAAGTCTATATTTTTTTATGTAGACTTTACACCGTCTCGTGGCAATACTCCGATTCACCATGCTTTTGCGACGCCTGGTGTGAACAAATCCTTGATTGAGAATAGAACTTCCCCTTCTCCATCTGAATCATCACCGGAAAAGAAAAAGAAACTTTTAGAGCTATTTAAAGATAGTGTGAAAGAAAATCAAGATGATGAGAGTAAAGAAAAGAGACAAGTGAAACCAACTATACAAGATGTTCTACCTCAATCATCACACTCGACTCCTTCTTGCTCAAGAGCTAACTCTGTTAGCAGTGGTGAAGGAGTTAAGAACAATGATTATGTATTGGTTAGAGAGAAATCACATAAATCTTCGTTGTTTTGTATTCCGAGTTTGTCTTCGTGCCGTAGCTCTAGGGAGAGGAGGAGGAAGACAAGTCCTGCAATTGCAGTTGATGGTAAACAATGA | 720 | 0.3736 | MGSCSSIQRKPNTDNNNMKLKVSFFGSKTENLVIPSSPIKEQTKNGDFKKSPSKSTTNFINYGSKEETFFDSKPWIDSDCEDDFYSVNGGKSIFFYVDFTPSRGNTPIHHAFATPGVNKSLIENRTSPSPSESSPEKKKKLLELFKDSVKENQDDESKEKRQVKPTIQDVLPQSSHSTPSCSRANSVSSGEGVKNNDYVLVREKSHKSSLFCIPSLSSCRSSRERRRKTSPAIAVDGKQ | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa1g05044 | 239 | MobiDBLite | consensus disorder prediction | 119 | 194 | - | - | |
| Vifa1g05044 | 239 | MobiDBLite | consensus disorder prediction | 218 | 239 | - | - | |
| Vifa1g05044 | 239 | MobiDBLite | consensus disorder prediction | 35 | 56 | - | - | |
| Vifa1g05044 | 239 | MobiDBLite | consensus disorder prediction | 132 | 165 | - | - | |
| Vifa1g05044 | 239 | PANTHER | OS01G0920100 PROTEIN | 1 | 230 | IPR038947 | - | |
| Vifa1g05044 | 239 | MobiDBLite | consensus disorder prediction | 167 | 193 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vifa1g05044 | Vifa-Chr1 | 785908467 | 785910130 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa1g05044 | - | - | tpra:123885555 | 305.064 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vifa1g05044 | 1 | 785908467 | 785910130 | Vifa1g05044 | 1 | 785908467 | 785910130 | ECH | |
| Vifa1g05044 | 1 | 785908467 | 785910130 | Vifa1g05045 | 1 | 785908467 | 785910130 | PCT |