Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04953 ATGGACACAGAACAACAACTACAACACCGCCGCAAGAGAAAAAGAGGTGTAGTAAAACACTTCCACATATCATCAAGATCACTTTTTCTCTGCTTTTCCTTCTTCATCTTCTTACTTTTCTTATCAAACTACCATGGTTTCTTCACTCATAAACCCCCGCTATCTTCATCCACTTTATCACTTCTTTACTCTTCCGCAAGTTTATCAATTCTTGATGACCCTCTTCAATCCACCGCCGCAAAAGTATCTTCAACAACGCTTTCTTTGTCTCTTCAACACCAAATCCTCTTCCCAAATCACTACCTCATAATCCTCAACAATGAAAAACTCCAAACCCATGAAGTTGAGTGTTTTTATTATACACTCAACGGTTCTTCTTCCGGTTCAGCTAAACCAGTTCTATCTATGGACTATTACGACGAATCTCGATCCGTAGCGAGATGCCCATTTCCTGAAACGAACGACTCGACTTCCGGCGGGTTTAAAGTTGTCGACTTGCGGCGGTTTGGGGAAGTGGGTCGTCGGAATTTGAGTGTTTTGAGGAAACAACCGCCGCAATCTTGGGATAGGGTTGCATATGAAGCGATGTTGGACGGTGATACTGTTGTTGTTTTTGTGAAAGGGTTGAATCTTCGACCGCACAAGATCTCGGATCCGACGAATTTTCGTTGCCATTTTGGGTTACGAAGCTTCCACAAAGATGGTGTTGGAGCTTCTTTTTTGCTTAGCACGAAAGCAGTTTCGGTGGCTCAAGAAATCGTGAGGTGTGTTTTGCCGTTGAGTATAAGAAACAAACCTGAGAAAGCTCGTGGTGTTAGGGTCACTGTGAGTAATTTGAGTGGGAATTTGAGGCGGCAAGTTCGTACCCTTTTGCCGTCGGTAGCTAGAGTTGGTAGCGGAAGAAGTGTTGAGAAGAGGAGTAGTGAGAAATATGAGCTTTGTGTTTGTACTATGGTTTGGAATCAAGCTTCTGCTTTGAGAGAATGGATTATGTATCATTCATGGCTTGGAGTGGAGCGTTGGTTTATCTATGATAACAATAGTGATGATGGTATCGAAAATGTGGTTAATGATCTTGATTCGAAAGGGTTTAATGTTAGTAGAAAAGTTTGGCCTTGGATTAAGACACAAGAAGCAGGGTTTTCTCATTGTGCTTTGAGAGCTAGAGAGGATTGTAAATGGGTTGGATTCTTCGATGTCGATGAGTTTTTCTATTTCCCTAACGAGGTTCGTCGTCATAACGAGCCCGGTGAAAGTAGTAGTACTAGTTCTAGTACTAGTACTAGTGTTCCTGGTGAGAAATCGTTGAGGTCAGTTGTAGCGAATTTCTCGTCTTCAACGACAATCGCTGAGATACGAACGGCGTGTCATAGTTTCGGACCATCTGGTTTAACTTCACACCCGAAACAAGGTGTTACTATAGGGTACACATGTAGACTTGCCAGCCCCGAGCGGCACAAATCTATTGTCCGACCAGATTTGCTCGACGCGAGTCTTTTGAATGTGGTACATCATTTTCAGTTAAAGGAGGGGTTTGAGTCCTACAACATGCCTGAACATAGTGTGATAGTGAACCACTACAAGTATCAAGTTTGGGAGAGTTTTAAAGCAAAGTTTTTCAGAAGAGTTGCAACCTATGTTGTTGATTGGCAGCAAGATCAAAACAAAGGGTCAAAAGATAGAGCACCAGGACTTGGAACAGAAGCTATTGAACCAGATAATTGGAGGTTAAGGTTTTGTGAGGTTAAGGATACTGGTTTGAAGGACTATGTTTTGTCTCATTTTGCTGATCCTGCAACAGGATCAATGCCATGGGAAAAACATTAA 1827 0.4242 MDTEQQLQHRRKRKRGVVKHFHISSRSLFLCFSFFIFLLFLSNYHGFFTHKPPLSSSTLSLLYSSASLSILDDPLQSTAAKVSSTTLSLSLQHQILFPNHYLIILNNEKLQTHEVECFYYTLNGSSSGSAKPVLSMDYYDESRSVARCPFPETNDSTSGGFKVVDLRRFGEVGRRNLSVLRKQPPQSWDRVAYEAMLDGDTVVVFVKGLNLRPHKISDPTNFRCHFGLRSFHKDGVGASFLLSTKAVSVAQEIVRCVLPLSIRNKPEKARGVRVTVSNLSGNLRRQVRTLLPSVARVGSGRSVEKRSSEKYELCVCTMVWNQASALREWIMYHSWLGVERWFIYDNNSDDGIENVVNDLDSKGFNVSRKVWPWIKTQEAGFSHCALRAREDCKWVGFFDVDEFFYFPNEVRRHNEPGESSSTSSSTSTSVPGEKSLRSVVANFSSSTTIAEIRTACHSFGPSGLTSHPKQGVTIGYTCRLASPERHKSIVRPDLLDASLLNVVHHFQLKEGFESYNMPEHSVIVNHYKYQVWESFKAKFFRRVATYVVDWQQDQNKGSKDRAPGLGTEAIEPDNWRLRFCEVKDTGLKDYVLSHFADPATGSMPWEKH 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04953 608 MobiDBLite consensus disorder prediction 417 433 - -
Vifa1g04953 608 Pfam Glycosyltransferase family 92 310 571 IPR008166 -
Vifa1g04953 608 PANTHER UNCHARACTERIZED 28 599 - -
Vifa1g04953 608 MobiDBLite consensus disorder prediction 413 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04953 Vifa-Chr1 771680133 771681959 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04953 - - psat:127119446 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04953 1 771680133 771681959 Vifa1g04953 1 771680133 771681959 ECH
Vifa1g04953 1 771680133 771681959 Vifa1g04953 1 771680133 771681959 PCT