Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04909 ATGGACATTTACCATTTTTTGTGTTTGCAGTATAGAGATTCTGAAGGAGTTCAACATTCAATTGCTGCTGTGTTTTTGGGGAAGGTTAACTCCCTCAGTGCTTCAAAACTAAAAAACATGATATGTTCTGTGGATTCTTTTGCATTAAATTCAGCTGATGCAGATTCTGAATTGAAAGAAGATCCCGTATCATCATATAACGTAGCTCTTGGCTCAGATAACTCTTGGTATCTATTTACAGATAAATGGATTCAAACAGTTTATGAGACAGGACTTCCTGATGTTCCATTAGTCTTAGGAGATACCCGACCTCGAGAAATTATGAGCGATCTCCTTGATAAGGAAGACATGAAGTGGGATAACCTTGCCAACTCTGAACACGGTGGTTTATGGTTCACGGAAGGATCCCTGGAAGCATGGTCTTGGAGTTTAAATGTTCCTGTTTTGAGTAGCTTCTCTGAAAATGATGAACTGCTACTGAAGTCTCAAGCATACAAAGACGTGTCTGAACAATACAGGGGGCAAAGAAATAAAGTTGCACGCTTGAAAAAAAAGATGTCTCGGACTGAAGGCTATAAAGAATATAATAAAATCCTAGACGCAGCCAAGTTTGTCGAGGAGAAAATCAAGCAAATGAAGACTAGATCCAAACGTTTGACTAATCGAATAGAACAAATTGAACCCTTCAGGTTGGAAGGAATTTATGCAGCGATCCGTGGAGAAAATGAGCTCTGGCTTGCAATGGTTTTTCGCAGTAAAGTTTTACTAGAACTAAAACCTGCACAACTTGCTGGAGTGTGTGCAGGTTTGGGTGTCAGAGGGTATAAAAGTCAGACCTGGAAGAACAACAATTACATTTATGAGCCTTCTGCAACTGTTGTCAATGTCATAGGGCTATTGGATGAGCAAAGGAGTGCCTTATTGGCAATTCAAGAGAAGCATGGGGTAACAATATCTTGCTGTTTGGATAGCCAATTTTGTGGTATGGTTGAAGCTTGGGCTTCTGGGTTGACATGGAGAGAAATAATGATGGATTGTGCGATAGATGACGGTGATCTAGCTCGTCTCCTTCGACGGACCATTGATTTATTAGCTCAGATTCCTAAATTGCCAGATATTGATTCAGTGTTGAATGAACTTGCTGGGTAG 1149 0.403 MDIYHFLCLQYRDSEGVQHSIAAVFLGKVNSLSASKLKNMICSVDSFALNSADADSELKEDPVSSYNVALGSDNSWYLFTDKWIQTVYETGLPDVPLVLGDTRPREIMSDLLDKEDMKWDNLANSEHGGLWFTEGSLEAWSWSLNVPVLSSFSENDELLLKSQAYKDVSEQYRGQRNKVARLKKKMSRTEGYKEYNKILDAAKFVEEKIKQMKTRSKRLTNRIEQIEPFRLEGIYAAIRGENELWLAMVFRSKVLLELKPAQLAGVCAGLGVRGYKSQTWKNNNYIYEPSATVVNVIGLLDEQRSALLAIQEKHGVTISCCLDSQFCGMVEAWASGLTWREIMMDCAIDDGDLARLLRRTIDLLAQIPKLPDIDSVLNELAG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04909 382 Coils Coil 195 222 - -
Vifa1g04909 382 SMART DSHCT_2 232 382 IPR012961 -
Vifa1g04909 382 Coils Coil 165 185 - -
Vifa1g04909 382 Pfam DSHCT (NUC185) domain 235 378 IPR012961 -
Vifa1g04909 382 Gene3D - 157 381 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04909 K26077 - gmx:100780908 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04909 1 766492924 766494200 Vifa1g04909 1 766492924 766494200 ECH