Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04902 ATGCTTCCCCTACGCTTAACCGTCGTCGTTTCATCTCTCCTCCTTTCTTGCATCTTCCAACCCTTCTGTCTCGGGATCCGCTCCTTCCCCACCGTAGACTCCACCGCCACCGCCACCACCACCACCGCCGCCACCACTAACCTCTTCCACTTCTCCGAAGCCCCGGAGTATCGAAACGGCGCCGGTTGCCCTGTCCCCGGCAACAAAAACTCCATCCCATCATGCGACCCATCACTAGTCCACATCGCAATGACACTCGACTCCGGCTACCTGCGCGGCTCCATCGCCGCCGTCCACTCCGTGCTCCGCCACTCCTCCTGCCCCGAAAACGTTTTCTTCCATTTCATCTCCGCCGAGTTCGACCCAGTGAGTCCACGTGTATTGACTCGTTTGCGCTAG 399 0.594 MLPLRLTVVVSSLLLSCIFQPFCLGIRSFPTVDSTATATTTTAATTNLFHFSEAPEYRNGAGCPVPGNKNSIPSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPENVFFHFISAEFDPVSPRVLTRLR 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04902 132 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 29 118 - -
Vifa1g04902 132 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Vifa1g04902 132 SUPERFAMILY Nucleotide-diphospho-sugar transferases 80 130 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04902 Vifa-Chr1 764551318 764551807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04902 2 131 Glycosyltransferase AT1G70090 54.135 1.97e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04902 - - psat:127119437 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04902 1 764551318 764551807 Vifa1g04902 1 764551318 764551807 ECH