Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04870 ATGAAGTGCGCGGCGAATGGAAGCGGAACACGGTGCAGCGGCGCCGCAACGACAGTGTGTGCACGCTGTGAAGCCGTTGCGTATTGCTCCCTCTCTCATCGGATTGCGCATTGGAATCATCACAAAAACGAGTGTGATAGGTTAAAGCAACAGATGGAGAGTGTTGATCTTCTCAATCATTTTCCTTTCACTTTCTTTCACCAAGCCACCTTTCAGGTTTGTGCAAAACAGGAAACTAGGTGTTCATTTTTGAGCAAGAGAGGCCTTCATCAAGTGGGAATGTGGATGAGTGAATGCCATTGCGGAGCATCATCTTCTTCATTTGATCTCTTAGGGTTAAACAATGGCTGGGACCTTCCAAGTGTTCTGTGTCCTTGTCTTGGTCCTGAATCTCTTGTTTCAGAGCAGTTGTGTAGTTGGAGAGACTACTATAAGTGGAGGTCCATCCAGCTTGACTCGCCTGTTGCCCTGCTTCTTCACTGGCCTCTTACAGTATATCATGCTGCTCAACTTGTTGGAATTACAGCCTTGAATCTTGCAGTCAGTGATAAGTTGTACATACATTACCTTGGACCTGAGAAGGAGCTGCTACAACTTGCTGTGTTTGGAGAATTACAAGTTCTAATCCCTGGTGTGCATATTCATATAGAACTTGTTGGACCTGCAATTCCCCCTCAAAGGGATGGTGAGAAGATCAGCATTTCTAAGTATCCATGTTGCAATGAAGCCAAATGTGTTTGCAAACTGGAGAATGAAAATGTGATCTCAGGAACACAAACAGGTTCGAGTTCAGCATTGACTTTGCGGCTTTGGCGAGGATTCTATCACGACAGATACAAAGATATTGTTAAGGATTCCTTTCCTCACCTAATTATTGCTCCAAATGGTGGCGTTGCTGCCTATTCCAGTTGGTTACCAAGTATTGAGTTAATTGAAAAGATTGATGTCCCAGCTGTTTTTACTGATTATTGTGAGGAAGCTTGTCACCTTGCAGCAAGTTGCATAAAGACTGTAACTGGACGCCCTCTTAGATTACCTGTTCAATTAAATCCTTTCAGGCAGCCTATTGCTGTAGAAGACAGCGTGTTGTTGCTTCCATGCTACTCAAATTGCTTTCTTTTTGGTATGTAA 1131 0.4385 MKCAANGSGTRCSGAATTVCARCEAVAYCSLSHRIAHWNHHKNECDRLKQQMESVDLLNHFPFTFFHQATFQVCAKQETRCSFLSKRGLHQVGMWMSECHCGASSSSFDLLGLNNGWDLPSVLCPCLGPESLVSEQLCSWRDYYKWRSIQLDSPVALLLHWPLTVYHAAQLVGITALNLAVSDKLYIHYLGPEKELLQLAVFGELQVLIPGVHIHIELVGPAIPPQRDGEKISISKYPCCNEAKCVCKLENENVISGTQTGSSSALTLRLWRGFYHDRYKDIVKDSFPHLIIAPNGGVAAYSSWLPSIELIEKIDVPAVFTDYCEEACHLAASCIKTVTGRPLRLPVQLNPFRQPIAVEDSVLLLPCYSNCFLFGM 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04870 376 Pfam MSS51 C-terminal domain 162 360 IPR046824 -
Vifa1g04870 376 Gene3D - 2 52 - -
Vifa1g04870 376 ProSiteProfiles Zinc finger MYND-type profile. 9 45 IPR002893 -
Vifa1g04870 376 PANTHER ZINC ION BINDING PROTEIN 2 376 - -
Vifa1g04870 376 Pfam MYND finger 12 45 IPR002893 -
Vifa1g04870 376 SUPERFAMILY HIT/MYND zinc finger-like 11 51 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04870 K24081 - gmx:100808017 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04870 1 761079630 761083216 Vifa1g04870 1 761079630 761083216 ECH