Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04762 ATGGACCACATCGCCGATGCACAACGCACCGATTTGATGACCATAACCCGTTTCGTTCTCAACGAACAATCAAAGCACCCTGAATCTCGCGGCGATTTCACCATCTTGCTCAGTCACATTGTTCTTGGATGCAAATTCGTTTGCTCCGCTGTTAACAAGGCTGGTCTTGCTAAGCTCATTGGACTTGCTGGAGAGACTAATGTACAGGGTGAAGAACAGAAGAAGCTGGATGTTCTTTCCAATGATGTGTTCATCAAGGCTTTGAAAAGCAGTGGCAGAACATCCATCTTGGTTTCTGAAGAAGATGAGGAGGCAATATTTGTGGAGCCTTCGCTACGTGGAAAGTACTGTGTTGTTTTTGATCCACTGGATGGCTCCTCCAACATTGATTGTGGTGTTTCCATTGGAACTATTTTTGGGATTTATATGATGCAAGATAACCATGAACCAGTCATAGAAGATGTCCTGCAACCTGGGAAGAACATGTTGGCAGCTGGTTATTGCATGTATGGAAGCTCTTGCACGCTTGTAATAAGCACCGGAAGTGGTGTCAATGGTTTCACCCTTGACCCTTCTCTTGGTGAATTCATCCTAACTCACCCTGACATTAAGATCCCAAAGAAAGGCAAGATTTATTCTGTGAATGAAGGGAATGCCAAGAACTGGGATGGCCCTACTGCCGCTTATGTGGAGAAATGCAAGTTTCCCACAGATGGTTCATCAGCAAAGTCTCTAAGATATATCGGAAGCATGGTAGCTGATGTTCATCGCACATTGCTTTATGGAGGTGTCTTTTTGTACCCTGCTGACAAAAAGAGTCCAAGTGGAAAGCTTCGTGTATTGTATGAGGTCTTCCCAATGTCCTTCTTGTTGGAACAGGCAGGAGGACAGTCTTTCACCGGCAAGGAAAGGGCACTTGATTTAATTCCAACAAAATTGCATGAACGATCTCCGATATTTCTGGGTAGCTATGACGATATTGAAGAAATCAAAGCTCTGTATGCTGCAGAAGAGGGTAAATAA 1023 0.4418 MDHIADAQRTDLMTITRFVLNEQSKHPESRGDFTILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFIKALKSSGRTSILVSEEDEEAIFVEPSLRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYMMQDNHEPVIEDVLQPGKNMLAAGYCMYGSSCTLVISTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAAYVEKCKFPTDGSSAKSLRYIGSMVADVHRTLLYGGVFLYPADKKSPSGKLRVLYEVFPMSFLLEQAGGQSFTGKERALDLIPTKLHERSPIFLGSYDDIEEIKALYAAEEGK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04762 340 PIRSF FBPtase_SBPase 9 340 IPR000146 GO:0005975|GO:0016791
Vifa1g04762 340 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Vifa1g04762 340 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Vifa1g04762 340 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Vifa1g04762 340 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Vifa1g04762 340 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Vifa1g04762 340 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Vifa1g04762 340 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Vifa1g04762 340 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Vifa1g04762 340 PIRSF FBPtase 9 339 IPR028343 GO:0042132
Vifa1g04762 340 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 203 - -
Vifa1g04762 340 Gene3D - 204 340 - -
Vifa1g04762 340 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Vifa1g04762 340 SUPERFAMILY Carbohydrate phosphatase 8 334 - -
Vifa1g04762 340 FunFam Fructose-1,6-bisphosphatase class 1 204 337 - -
Vifa1g04762 340 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 4 336 IPR000146 GO:0005975|GO:0016791
Vifa1g04762 340 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Vifa1g04762 340 Gene3D - 4 203 - -
Vifa1g04762 340 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04762 Vifa-Chr1 744027727 744033547 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04762 K03841 - cit:102611558 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04762 1 744027727 744033547 Vifa1g04762 1 744027727 744033547 ECH