Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04678 ATGGCAACACTAGCACCTGGAATTCTGTTAAAGCTTCTAAACGGAATAAACACCGGCGTTAAACCAACAAGCGAGCATCGGAGTTCTCTCTTACAAGTCACCGACATCGTCCCCGCCGATCTCGACGAGAAAAGCCTCTTCCCGAAACAAGGCTTTTACATCAAGGTTTCTGATTCTTCGCATTCGATTTACGTCACTCTTCCGTCCGATGAACACGATTTTGTTCTGAGTAATAAAATGCAGTTAGGTCAGTTTATTTATGTTGATAGATTGGAGCCCGGTTCACCTGTTCCGGTTCTCAAAGGAGCTAAACCGTTACCGGGGAGACATCCTTTCATCGGGACCCCGGAGCCTTTGTTGGGCCTAAGGGAAAAAGCCCAAACCCAAGCCCAGGCCCAATCGTGTAAGCCCTCTGTTAGAGGTTCTTGGGGGACAGGGAGGAAGAAGAAGAAAAATGATGAAGATGGTGACGGGGATGGTGATGATGGTGGTGGTGCTTTTTCTTGTTCTCCCATGGTTTTTAAGCCGGTGAATTTGGATTTTGATCAGTGTACACCTGTTAGAGGGAGGAATTTTGTTGGAAAAGATGGAACTCCGGTGAGATGTTCTGTTGGTGGTGGGCTTTTTGGGAAAATGAGTGATGGGAAAGGTGAAAGTCCTGCGTTGATGAGAAAAAGCTGTGTTGTTGGTTCTTCTAATTCCAAGATTACACGAAGTAGGAGTGTTTCTGAAAGAGAGAATAGGATGCCTTCTGCTAGTCCCTTCAAGTCAAATGAAAAGAAAGGTGGTACTCCGCCACCTCGGCTGAGACATGCAAGAGTGGCGAGTTCTGCTGGTGTTACTGGAGGAGATGCTCACAAAGAGGACTCGAGTGTCACCTCTCAACAGAAATCTCAGTCTACAACTAATTCAGCTTTTGATGATTCCAACAATCTTACTCTCCCCATGAATTTACCAGCAAGACTCAGCTCCTTAGGAAAGGAAGCTGTGCAGCAAAGAGAAGTGGCTCAAAAGATTGCCCTTCAAGCATTAAGAGATGCTTCAGCCACTGAGACCGTCGTTCGATCACTTAAGATGTTTTCAAATTTATGCAAATCGGCTCGAGCTGATGCACCTGCTACATGTTTTGAACGGTTTTTGGAATTTCATAGTGATATTGCACTAGGAGTTAATGCAATGATGTCAATGCAAGCAGCTACTTCTGCATCAGAATTGGCTTCAAAATCGGATAAACAAGTTGAAGAAGAACAACTAAAGGTTTTACACGAAGTTACACTAAATTCTGTCGACCAATCAGGAAACTCTATCGAATCAAACACGTCAAAAAGAAGATGTGCTTATAGAGCAAAAGTGGGCAAACTTTTGAGATCATCAAGTAGTAACCCAAAGGAGATTTTGGAGAAGAAAGGTTCTACCCTGGAACCTATTGGCGAAAACGACGAGAATAAGAAACCAGTTTCTTGCAGCTTAAGCAACACGATCAAGTTGGGAAAACAGATTGAAACAGAAGCTGGAAATTGGTTTATGGATTTCATTGAGAAGGCACTGGAAGCGGGTTTGAAGAAAACAAAGGAAGCGTCAAACGGGGATGTTCGTAAGGTTTCTCAGTCTCTCATAATTAAAGTTATGAACTGGGTTGAGGTTGAACAATACCATAGTAACAAGAGGCCTAGCCACCCTAAAGCGGCGCAGATTGCTCGGAAGTTAAGAATAAAGATAAAAAATCCTTGA 1731 0.4362 MATLAPGILLKLLNGINTGVKPTSEHRSSLLQVTDIVPADLDEKSLFPKQGFYIKVSDSSHSIYVTLPSDEHDFVLSNKMQLGQFIYVDRLEPGSPVPVLKGAKPLPGRHPFIGTPEPLLGLREKAQTQAQAQSCKPSVRGSWGTGRKKKKNDEDGDGDGDDGGGAFSCSPMVFKPVNLDFDQCTPVRGRNFVGKDGTPVRCSVGGGLFGKMSDGKGESPALMRKSCVVGSSNSKITRSRSVSERENRMPSASPFKSNEKKGGTPPPRLRHARVASSAGVTGGDAHKEDSSVTSQQKSQSTTNSAFDDSNNLTLPMNLPARLSSLGKEAVQQREVAQKIALQALRDASATETVVRSLKMFSNLCKSARADAPATCFERFLEFHSDIALGVNAMMSMQAATSASELASKSDKQVEEEQLKVLHEVTLNSVDQSGNSIESNTSKRRCAYRAKVGKLLRSSSSNPKEILEKKGSTLEPIGENDENKKPVSCSLSNTIKLGKQIETEAGNWFMDFIEKALEAGLKKTKEASNGDVRKVSQSLIIKVMNWVEVEQYHSNKRPSHPKAAQIARKLRIKIKNP 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04678 576 MobiDBLite consensus disorder prediction 126 140 - -
Vifa1g04678 576 Pfam Plant protein of unknown function (DUF936) 4 304 IPR010341 -
Vifa1g04678 576 Pfam Plant protein of unknown function (DUF936) 317 547 IPR010341 -
Vifa1g04678 576 PANTHER EXPRESSED PROTEIN 1 558 IPR010341 -
Vifa1g04678 576 MobiDBLite consensus disorder prediction 125 164 - -
Vifa1g04678 576 MobiDBLite consensus disorder prediction 467 481 - -
Vifa1g04678 576 MobiDBLite consensus disorder prediction 228 312 - -
Vifa1g04678 576 MobiDBLite consensus disorder prediction 461 484 - -
Vifa1g04678 576 MobiDBLite consensus disorder prediction 287 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04678 Vifa-Chr1 731094428 731096865 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04678 - - gmx:100808883 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04678 1 731094428 731096865 Vifa1g04678 1 731094428 731096865 ECH