Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04659 ATGCATTTTTCATCTCTCCTCTCTCACACCCAATTTCATTTCTGCTTTACTTTCAGGATTTTTAATATGGTTGATTCAAAACAAGGATTGAGGAAACCGGTGTTTACCAAGGTTGATCAGCTTCGCCCAGGGACCAGCGGACACACCATAACTGTGAAGGTTGTTGATACTAAGATGGTGATGCAGAGAGGTCGTCCTGATGGACCTCAATCCCGTCAAATGCGAATTGCTGAGAGTTTTGTTGGTGATGAGACTGGAGTGATCATACTTACCGCAAGAAATGATCAGGTGGATTTGATGAAAGAAGGCTCCACTATCATCCTACGTAATGCTAAGATTGACATGTTCAAAGGCTCAATGAGACTTGCCGTGGACAAATGGGGCCGTATTGAAGTCACAGAACCAGCTACCTTCACTGTCAAGGAAGATAATAACATGTCTCTGATTGAGTATGAACTGGTGAATGTTGTTGTTGAATGA 480 0.4271 MHFSSLLSHTQFHFCFTFRIFNMVDSKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESFVGDETGVIILTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDKWGRIEVTEPATFTVKEDNNMSLIEYELVNVVVE 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04659 159 PANTHER OS05G0244600 PROTEIN 25 156 - -
Vifa1g04659 159 FunFam Uncharacterized protein At4g28440 45 148 - -
Vifa1g04659 159 Gene3D - 45 148 IPR012340 -
Vifa1g04659 159 CDD SoSSB_OBF 49 132 - -
Vifa1g04659 159 SUPERFAMILY Nucleic acid-binding proteins 25 157 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04659 Vifa-Chr1 728751917 728755063 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04659 - - gmx:100526985 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04659 1 728751917 728755063 Vifa1g04659 1 728751917 728755063 ECH