Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04638 ATGGAGTTTTCTTCGGTTCAGAAACTTTGCTTACACTTAATTTCTTCAGCATATCAGAGATGCCGATTATCCGAACAGATTTGCAGACTCTCAGTTGGTCTCACTTGCTCTTCATCTTCCGATCCTTCTCTTAAAATTTCTATATCTGATACTGGCTTAGGAAGCAGCTTAGTGGAATTTCAAGAAATGAGGTTTTCTTTCGCAAATGTTGCTGACAATTGGGCAGATGGAATGCTTTCTATCAAAACCACCAGTATCAGTGATAGTGAGATACATAATTATCAGATAAATCTGAAAGAAAGTGGTTCCTCCAGAATAACTAAACTACCTTCAGATGCAAAAAATGGTGCAAAATTCAGTGGTAGCGAAGTTTGCCTTTCTACTATTGTTAACCCTGATCTCTTGCTGGCTGAAATTCATAACCTCCTAGAGAAGATGTTAATTCTAAATATTCCTAATGTAGCAATTCAATTAGTAGCAGAAGATAGCGATGTACCTGAATCACGATATGAAAAGGTCTTTCTTGCAAATACGTGCGAGCAGTTGCCAATCTCAACATCAAGTATTGAACATCTTAAGTCAGGCCTCGAAGACTATGTACTTAAGCATGGAAATAACTTAAGTGACCACTGTACCTCTTGCTTCACAAGAAGGGAGGAGGTCAAAGTTGGCAGTGGAGTGGCTTGCAGCAGTGAAAACCGTCTACACACTGAACTGGTGATGGAAGCGGTCTTAGCAATAAGTAATATATCAACTCAAAACACTACGTGCTTCAGAGAATATGGTGACAAAACAGAGGTTTTGTATTTCAAAGACTTTTCACCAAGCACAATGTCTCCTTCATCTATGAAGGCATTGAAAAGCATTGACTGGAAAAGATATGGTTTGCATTTAGGGCGTATAGTAGAGCAAGATGGCATAGCATTACTAGAATGGGAAAACCTCCCTACTGATACTCACATTGATATTGTCCTCCACTCATATCTAAAACAATATCCAACATCTGAGACAGCTAAACATATAACCGGGATACCTGCGCCAAGGAAAAGGTCTCAAATTGATAGAAGCCTTGTTAAAAGAGCTATTAAATTTTCTCTGGATGACTTGAAGGCTAAGCATTCTGGGGATTTTCTTAGTTTGCGTGCCCTCCAGATTCGCAATTATGCCCCTGATCTTGCTCAAACAATTGCTGGACTGATCTTCTCTTCCAGTGACTTAAATTTTCAGAGAGAATGTTTTTCACTACTTGGATTACAGTCTCAAGATGTTGGAACTGAAATCATGGAAAACAGTATCATGGAAAAAATTGTTTCAGTTATAGAGATGAACGACAAGGATCCTGACAAATCTAAAGAAATCGCGTCTTTCCTTTTCGAGGAGGATGATCATATCCAGGAGGAACTGGAAGTAGAGTTTCAAGAAAACTATTTCAGCCCCTTGGACCTGGACATCAATATGTTTTAA 1464 0.3887 MEFSSVQKLCLHLISSAYQRCRLSEQICRLSVGLTCSSSSDPSLKISISDTGLGSSLVEFQEMRFSFANVADNWADGMLSIKTTSISDSEIHNYQINLKESGSSRITKLPSDAKNGAKFSGSEVCLSTIVNPDLLLAEIHNLLEKMLILNIPNVAIQLVAEDSDVPESRYEKVFLANTCEQLPISTSSIEHLKSGLEDYVLKHGNNLSDHCTSCFTRREEVKVGSGVACSSENRLHTELVMEAVLAISNISTQNTTCFREYGDKTEVLYFKDFSPSTMSPSSMKALKSIDWKRYGLHLGRIVEQDGIALLEWENLPTDTHIDIVLHSYLKQYPTSETAKHITGIPAPRKRSQIDRSLVKRAIKFSLDDLKAKHSGDFLSLRALQIRNYAPDLAQTIAGLIFSSSDLNFQRECFSLLGLQSQDVGTEIMENSIMEKIVSVIEMNDKDPDKSKEIASFLFEEDDHIQEELEVEFQENYFSPLDLDINMF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04638 487 PANTHER TYPE 2 DNA TOPOISOMERASE 6 SUBUNIT B-LIKE 4 474 IPR034566 GO:0042138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04638 Vifa-Chr1 726328436 726333109 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04638 - - mtr:11413525 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04638 1 726328436 726333109 Vifa1g04638 1 726328436 726333109 ECH