Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04609 ATGCAAGAGTTAGATCAATGGAAGGAACATATTTCTCACCTGTTGAATGTCGCAAACGATTATATTCGTGAAATTCCTTCTGATCAACTCTACGCGGCTGCTGCTATCGCGGTTTTCACAACCCTAATTCTTCTCCTGCTTCGGTTTTTTAAGCGCGCCAAGTCGAACACCATTGTGTTGACTGGTCTTAGTGGGAGTGGGAAAACTGTTATCTTCTATCAGCTTAAGGATGGCTCTACTCATCAAGGTACTGTTACATCAATGGAACCAAATGAAGACACTTTTATTCTTCATAGTGAAACACTGAAGAAGGGAAAGATAAAACCAGTTCATATTGTGGATGTTCCCGGACATTCTCGTCTTCGACCCAAATTGGATGAGTACTTGCCTCAAGCAGCTGGCACAGTCTTTGTTGTCGATGCTTTGGACTTCTTACCGAATTGCCGTCCTGCCTCAGAGTACCTATACGATCTGTTGACTAAGGGAAGTGTTGTGAGGAAGAAGATTCCACTGCTTATTCTCTGCAACAAAACCGACAAAGTCACTGCTCACACCAAAGAATTTATCTGCAGACAACTCGAGAAAGAAATCGACAAATTGCGGGCATCAAGAAGTGCAGTTTCAGATGCCGATGTTACAAATGAGTTTACTCTGGGGGTGCCTGGTGAGCCATTCTCGTTTAAACAGTGCTCTAACACAGTTACGACCGCAGATGCTTCTGGTTTAACCGGGGAGATATCTCAGCTAGAAGAGTTTATCAGACAACACGTGAAGCCATAG 780 0.4372 MQELDQWKEHISHLLNVANDYIREIPSDQLYAAAAIAVFTTLILLLLRFFKRAKSNTIVLTGLSGSGKTVIFYQLKDGSTHQGTVTSMEPNEDTFILHSETLKKGKIKPVHIVDVPGHSRLRPKLDEYLPQAAGTVFVVDALDFLPNCRPASEYLYDLLTKGSVVRKKIPLLILCNKTDKVTAHTKEFICRQLEKEIDKLRASRSAVSDADVTNEFTLGVPGEPFSFKQCSNTVTTADASGLTGEISQLEEFIRQHVKP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04609 259 Gene3D - 50 257 IPR027417 -
Vifa1g04609 259 ProSiteProfiles small GTPase Arf family profile. 49 253 - -
Vifa1g04609 259 PANTHER TRANSFERRIN 25 255 - -
Vifa1g04609 259 Coils Coil 190 210 - -
Vifa1g04609 259 Pfam Signal recognition particle receptor beta subunit 54 234 IPR019009 -
Vifa1g04609 259 CDD SR_beta 56 255 IPR019009 -
Vifa1g04609 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 205 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04609 Vifa-Chr1 722431300 722433757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04609 20 259 Miscellaneous Gene Families AT5G05670 70.124 2.78e-126 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04609 K12272 - gmx:100800572 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04609 1 722431300 722433757 Vifa1g04609 1 722431300 722433757 ECH