Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04493 ATGTCATCACATCGTTACGAACTCGACCTCACTCTCAAATCAGCAAAAGCACTCAAGAACGTGAACTGGCGCCATGGCGCTAACCAACCATACGCCGTGGTTTGGGTTGATCAAGCCAACAAGTTCACCACCAATGTAGACGCAAATGGCGACACGGAAGCTGACTGGAATCAAACAATGATCCTCCCTTTACCACCGATACGGTTCGAGGATCTCACTTTATACATAGATATCGTTCACGCTGGATTTGAAGAAGATACTAAGAAACTCATCGGCTCGGCTCGGCTCCAGCTCGTTGATGTTCTTGATTTCGGTATCGGCGAGCGGGAGAGTCGTGTGCTCACATTGAAACGGCCTTCTGGAAGGCCGCAAGGGAAGGTTGAGGTTAAGGTGGGGATCAGAGAGAATGCCTATCATGCGCAGGGTGCGTATTATCCTCCTGCTTACGGTGTTCCTTACGGTGCTCCTGCTCAACCGGGACCGTATTATTCAGCTGATCCGCCAGCGGGGTACCCTCAAACGCCGTCGTATAGTTCACAAACGAATGTGTATGTACAAGTGGAGGAAAAGAAGAAGAGTAAGTTTGGTGGAATGGGAACGGGATTGGCTGTGGGAGCGGTTGCTGGGGTACTTGGTGGAGTCGCGTTGGTTGAAGGTGCTGAGTACATTGCAGAAAAACTTTCCGATGATGATGATTTCTAG 702 0.5 MSSHRYELDLTLKSAKALKNVNWRHGANQPYAVVWVDQANKFTTNVDANGDTEADWNQTMILPLPPIRFEDLTLYIDIVHAGFEEDTKKLIGSARLQLVDVLDFGIGERESRVLTLKRPSGRPQGKVEVKVGIRENAYHAQGAYYPPAYGVPYGAPAQPGPYYSADPPAGYPQTPSYSSQTNVYVQVEEKKKSKFGGMGTGLAVGAVAGVLGGVALVEGAEYIAEKLSDDDDF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04493 233 PANTHER INGRESSION PROTEIN FIC1 7 206 - -
Vifa1g04493 233 Pfam C2 domain 7 100 IPR000008 -
Vifa1g04493 233 CDD C2_SRC2_like 7 129 IPR044750 GO:0006952
Vifa1g04493 233 Gene3D C2 domain 1 134 IPR035892 -
Vifa1g04493 233 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 132 IPR035892 -
Vifa1g04493 233 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04493 Vifa-Chr1 699640831 699641532 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04493 - - gmx:100817630 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04493 1 699640831 699641532 Vifa1g04493 1 699640831 699641532 ECH