Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04488 ATGGCATCATCTCGCTACGACCTCGATCTCAATCTCACATCAGCAAAATCACTCAAGAATGTCAACTGGCGCTACGGCCCTAACAAACCATACGCCGTCGTTTGGGTTGATCAAGCCAACAAATTCACAACCAATGTAGACTCAAATGGCGACACGGAAGCTGAATGGAATCAACCACTGATCCTCCCTTTGCCACTAAAACCGCTCGAAGATCTCACTTTATACATCGATATCGTTCACGCTGGATTTGAAGAAGATACTAAGAAACTCATCGGCTCGGCTCGGCTTAATCTTGTTGATGTTCTTGATGTTGGAATCGGCGAGCGTGTGAGTCGGACGCTCACATTGAAACGGCCTTCTGGAAGGCCACAAGGAAAGGTTGACGTTAAGGTGGGGATCAGAGAGAATGCTTATCACGCGCATCGTGCGTATTATCCTCCTCCTTATGGTGTTCCACCTCCTGAATCAAATTTGCGGGATTATTCCTCTGCTTCGCAGGTGTATGGTTATCCATACGGTGCACCTGCTCCACCTCAGCAACATGGATCGTATTATTCTCCTACGGCACCATCGGGGTACTCTCAAACGGTGTCGTATGGGCAAGGGGGTAATTATGTGTCGCAAACGACGGCGTATGGTCAAGAGGGTAATAATTATGGGGAAAAGACGTCGTATGTACGAGTGGAGGAAAAGAAGAAGAGTAAGTTTGGTGGGATGGGGACGGGATTGGCTGTAGGTGCGGTTGCTGGGGTACTTGGTGGAGTCGCATTGGTGGAAGGTGCTGAATATGTTGAAGATAAGATTGCTGATGACGTGGCAGAGAGGGTTGAGGATGATCTTGGTTACGATGATGATGATTTCTAG 864 0.4815 MASSRYDLDLNLTSAKSLKNVNWRYGPNKPYAVVWVDQANKFTTNVDSNGDTEAEWNQPLILPLPLKPLEDLTLYIDIVHAGFEEDTKKLIGSARLNLVDVLDVGIGERVSRTLTLKRPSGRPQGKVDVKVGIRENAYHAHRAYYPPPYGVPPPESNLRDYSSASQVYGYPYGAPAPPQQHGSYYSPTAPSGYSQTVSYGQGGNYVSQTTAYGQEGNNYGEKTSYVRVEEKKKSKFGGMGTGLAVGAVAGVLGGVALVEGAEYVEDKIADDVAERVEDDLGYDDDDF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04488 287 Pfam C2 domain 7 100 IPR000008 -
Vifa1g04488 287 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 131 IPR035892 -
Vifa1g04488 287 Gene3D C2 domain 7 133 IPR035892 -
Vifa1g04488 287 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Vifa1g04488 287 PANTHER INGRESSION PROTEIN FIC1 8 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04488 Vifa-Chr1 698477097 698477960 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04488 - - gmx:100817630 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04488 1 698477097 698477960 Vifa1g04488 1 698477097 698477960 ECH