Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04402 ATGAAAACTCTAATTTTTGCATCAAATCCATCTCTCCATTTCTCAAAACAAAAGATATTTCCAAGTTTTGACCACAAAGGGTTCTCCAACATTCCATTAACCACATTGAAGACACAAGCAAGTGCCAAAGGGTTGTCCAACACAAGACCATCATCATCAAAGGATAAAACTAAGGATGATGTGATTACCATGAAAAAGAATCCCAACAACAACAACAATGATGATGATGATATTAGTAAGGTAGTTATGTATAGAATAGTAGGTAGAATATTGGTTAGTGTTTTAGTTCCAATGGGAATAGGATTAGGGTTTTTGCATCTTTATGGTGAGTTAAAGGATAGAGAAATATGGAATGCTCCATTATGGATACCATTTTTGACAACACTTATAACATTTGGAGCTTCTGCACTTGGAATTGCATATGGTGTATTGTCTACTAGTTTGGATGAAGAAAGGGAAGGTTCTTTGCTTGGATTTCAAGAACTTGAGAAGAATTGGGTTGAAATGTGGCAACAAGAAGATATAAGTGATGATTAA 537 0.3464 MKTLIFASNPSLHFSKQKIFPSFDHKGFSNIPLTTLKTQASAKGLSNTRPSSSKDKTKDDVITMKKNPNNNNNDDDDISKVVMYRIVGRILVSVLVPMGIGLGFLHLYGELKDREIWNAPLWIPFLTTLITFGASALGIAYGVLSTSLDEEREGSLLGFQELEKNWVEMWQQEDISDD 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04402 178 MobiDBLite consensus disorder prediction 40 74 - -
Vifa1g04402 178 Pfam Photosynthesis affected mutant 68 33 172 IPR021855 -
Vifa1g04402 178 PANTHER PROTEIN PAM68, CHLOROPLASTIC 31 175 IPR021855 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04402 - - psat:127128967 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04402 1 684534304 684534840 Vifa1g04402 1 684534304 684534840 ECH