Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04387 ATGTTTCTCCGTGCGGTGGCGCGGCCATTGATGGCGAGGATAAAGCAAACAACAGGGATCGTCGGACTAGACGTTGTTCCGAACGCGAGAGAGGTCTTAATAGGTCTTTACAGTAAGACACTCAACGAGATCCAGAAGGTTCCAGAAGATGAAGGCTATCGTAAAGCTGTTGAAAGCTTTACCAATCACAGGCTTAAGGTTTGTCAGGAAGAAGAAGATTGGGAGAAGATTGAGAGTCGTCTTGGTTGTGGTCAGGTTGAAGAACTCATTGAAGAGGCTCAGGATGAACTCAAACTCATAGGCTATATGATTGAATGGGATCCTTGGGGTATCCCCGATGATCACGAAATTGAGATGGTTGAAAATGATGCACCAATTCCAAAGCACGTTCCTCAACACCGACCTCTTCCTCTCCCTAAGGAATTTCGAGATACGTTAGAGGCACTTATGTCTCAACCAGGAATGACAGAAAAGCTAGAGGCTCTTGTGTCTAAATCAGTAAAAGATGGTGCTGCTGCCAGCTCTAGTGAAGAACCCTCAAAGCCAAAACCATGA 555 0.4577 MFLRAVARPLMARIKQTTGIVGLDVVPNAREVLIGLYSKTLNEIQKVPEDEGYRKAVESFTNHRLKVCQEEEDWEKIESRLGCGQVEELIEEAQDELKLIGYMIEWDPWGIPDDHEIEMVENDAPIPKHVPQHRPLPLPKEFRDTLEALMSQPGMTEKLEALVSKSVKDGAAASSSEEPSKPKP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04387 184 Pfam ETC complex I subunit conserved region 22 88 IPR006806 GO:0022904
Vifa1g04387 184 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT 11 135 IPR006806 GO:0022904
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04387 Vifa-Chr1 681923761 681927871 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04387 K03949 - csv:101209685 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04387 1 681923761 681927871 Vifa1g04387 1 681923761 681927871 ECH