Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04322 ATGAAATCGTTGTTGAGATCCGCCGTGATATTGGTTTTGCCGGTGGTGTTAATCGTCGGCGCGTTGATTTACGCGCGGTTCGTCGAAACACCTGACATTTTCTCCAAAGTTTCATCAACCGAACCAGTTCTAACCACGAAAGCATACGAAATACCAACAAAGCCCCTAAATCCAATAGATTGCAATGGATACAACCTCACCAAAAAATGTGCCACTAACAATCCCGAAATCTCATTCTCCAATCAAGACCGTTCATCTAACTCCACGTGTCCAGATTACTTCCGTTGGATCCACGAAGATTTAAGGCCATGGGCCCACACAGGAATAACACAGGAAATGGTAGAGAAAGCAAAAGCAACGGCAAATTTCAAGTTGGTGATATTAAAAGGAAAAGTGTACTTAGAAACATATGAGAAAGCTTTTCAAACAAGAGATACTTTTACTCTATGGGGTATCCTACAGTTGTTAAGGAGGTACCCTGGAATGTTGCCTGATTTGGAGCTTATGTTTGATTGTGTTGATTGGCCAGTTGTTTTAATTGATCAAAATAATGTTGTTGCCCCACCTCCACTTTTTCGATATTGCGGTAATGATCTAACATTGGATATCGTCTTTCCTGATTGGTCTTTCTGGGGATGGGCCGAGGTTAATGTAAAGCCATGGGAGATTTTGTTGGGAGAGTTGAAAGAGGGGAACAAGAGGATTTCATGGGATAAAAGAGAACCTTATGCTTATTGGAAAGGTAATCCGACCGTTGCTGAAACAAGACAAAATCTCATGACATGTAATGTTTCTGATAAACAAGATTGGAATGCTCGTTTATATTCTCAGGATTGGGGACGAGAGTCGCAAGAAGGGTACAAGAAATCAGACTTGGCACGTCAATGCACTCATAGATATAAGGTGTACATTGAAGGGTCAGCTTGGTCCGTGAGTGAAAAATACATTCTAGCATGTGATTCTCCCACTTTACTTGTGAAACCTCATTATTATGATTTCTTCACAAGAGGGTTAATTCCAGTGCATCACTATTGGCCCATTAATGAAGATGATAAATGCAAGTCCATTAAATTTGCCGTGGATTGGGGCAATAGTCACACTGAAAAGGCACAAAATATTGGAAAAGCAGCAAGTGATTTCATTCAACAAGAGTTGAAGATGGATTATGTGTATGACTATATGTTTCATCTCCTAAATTCCTATGCTAAGCTCTTTAGATACCAACCCTCCATAAGTGATAAAGCTGTTGAACTATGTGTGGAATCAATGGTGTGTAATGCACAAGGATTAGAAAATAAATTTATGATTGAATCATTGGTCAAGAGCCCTTCAAACACCAACCCGTGCACTATGCCTCCCCCTTATGATCCTCCGTCTCTGGAAGCACAAATAAGAAGAAAACAAAATGCAATTCAACGAATCGAATCCAGAGAGAAGAGTTATTGGGAGAAACAAAATGTGAAACCGTAA 1470 0.4007 MKSLLRSAVILVLPVVLIVGALIYARFVETPDIFSKVSSTEPVLTTKAYEIPTKPLNPIDCNGYNLTKKCATNNPEISFSNQDRSSNSTCPDYFRWIHEDLRPWAHTGITQEMVEKAKATANFKLVILKGKVYLETYEKAFQTRDTFTLWGILQLLRRYPGMLPDLELMFDCVDWPVVLIDQNNVVAPPPLFRYCGNDLTLDIVFPDWSFWGWAEVNVKPWEILLGELKEGNKRISWDKREPYAYWKGNPTVAETRQNLMTCNVSDKQDWNARLYSQDWGRESQEGYKKSDLARQCTHRYKVYIEGSAWSVSEKYILACDSPTLLVKPHYYDFFTRGLIPVHHYWPINEDDKCKSIKFAVDWGNSHTEKAQNIGKAASDFIQQELKMDYVYDYMFHLLNSYAKLFRYQPSISDKAVELCVESMVCNAQGLENKFMIESLVKSPSNTNPCTMPPPYDPPSLEAQIRRKQNAIQRIESREKSYWEKQNVKP 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04322 489 Pfam Glycosyl transferase family 90 86 476 IPR006598 -
Vifa1g04322 489 SMART cap10 162 408 IPR006598 -
Vifa1g04322 489 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 68 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04322 Vifa-Chr1 670581062 670584001 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04322 - - gmx:100800365 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04322 1 670581062 670584001 Vifa1g04322 1 670581062 670584001 ECH