Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04315 ATGTCTAACATGGTTGAGGTTAGGGTTCCAAATCTTGATTGTGAAGGTTGTGCTTCAAAATTAAAGAAAGCTCTCTTTAAACTCAAAGGAGTAGATGATGTGGAAGTTGAAATGGAGGCACAAAAGATAACAGTGAGAGGATATGGTTTAGAAGAGAAAAAAGTATTGAAAGCAATAAAACGTACTGGAAAAACAGCAGAACCGTGGCCATTTCTTCCAGGACATGCACATTTTGCTTCATTTTATAAGTATCCAAGTTACATTGTTAATCATTATTACAATGATGCATACAAAAGTGAAGCAACTAATGGAGTTCATACTTTTTTTCACACACCTTCTGTATATTCAGTTGCTGTTGGTTCTGATGAGGTTTTTGCTTCAATGTTTAGTGATGATAATCCTCATGCTTGTACTATAATGTAA 423 0.3452 MSNMVEVRVPNLDCEGCASKLKKALFKLKGVDDVEVEMEAQKITVRGYGLEEKKVLKAIKRTGKTAEPWPFLPGHAHFASFYKYPSYIVNHYYNDAYKSEATNGVHTFFHTPSVYSVAVGSDEVFASMFSDDNPHACTIM 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04315 140 CDD HMA 6 67 IPR006121 GO:0046872
Vifa1g04315 140 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 137 IPR045181 GO:0046872
Vifa1g04315 140 ProSiteProfiles Heavy-metal-associated domain profile. 3 67 IPR006121 GO:0046872
Vifa1g04315 140 Pfam Heavy-metal-associated domain 7 64 IPR006121 GO:0046872
Vifa1g04315 140 Gene3D - 2 67 - -
Vifa1g04315 140 SUPERFAMILY HMA, heavy metal-associated domain 4 70 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04315 Vifa-Chr1 669542837 669543540 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04315 - - gmx:100802676 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04315 1 669542837 669543540 Vifa1g04315 1 669542837 669543540 ECH