Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04301 ATGCGAACTCGCTATCTGAACAACGACTACTTCACTCTCCCTCCATCCCACCGCCACGAATCCACCCCTTTCCTCCACCTCCCTGTACCTCGCCTCCCTACGCCGCTTTCCTCCTCCGTCGACCACCACCTCAACTTCTACTCCTCTCTCCCCGACGTCTCCCTCCACATCGATCCCTTCCCGATCCACTCCGCACTCTCCTCCTTCCTCTCCCTCGTCCTCCCTCACAAAATCGCGATTCCGATTCCAGATCCGTCTTCCTCCGTTACTGATTATCCAGAATCCAATAATTCGTTGCTGAGAGAGGCAGATTTTATCTTCGAAGATCGTGTCTCCAATGCTGATATTGAATTTTCCAAAGAGAGTAAAACTGTTACGCTTAGTAATGAAAGTGAAGTCGTCTATGAACCGTTTCAATTTGAAACACCTGAGCAGATGGATACACTCTTGGAAAATGTATGCTTCACTAAGAAGGAGAGGATGCAAATGCTGTCTCATACTCCAGAGGCTGAAAATAGCATGGAAATGTTTATGTCTGAGTCATTGATGCAGTACCCTTATGAGGATCTGGAATCAGTGTCAAGGATGGAAGATGTTATTTCTGAGTACCTAAAGGGGGAGAACGCATGTGCTTTAGAAGGTAATATTTCCGTTCAGCTCCTACCATACTCTGACAAAAAGACATTTCTCATTTTGGAAGTGGATGAAGAAAGTTTGGGAATTCCCACAAGCTTGTCTATGGTAGATATTGTTGAATCATATTTTGGGAATCTCAGACCTCAAAGTTTTGATGAACAATATCAGTTCATAACAGAGGGAAGGGAACTTTTGGATTCTAAAGTGCATGACCTGGTGAAGTTGTTCTCAGACGACTGTGTATCAAAGAAGAGTTTGATTTTATCAGATCTATTTCCTGAAAGAGATTTCTTAAATATGTTGGAAAATGAACATGTGGATGGGACATTGCAGGCTGATAGTGATTTGTTAGTGAATCTAATTACCTTCCAGGAGTTTGTGTTCCTTGACGAAGACATGATTAATAATACCTTTGAAGCTTCTTATGATACAAAAGCATCGGATGATCTAGAAGCAAGTGACTGGATGTTCAAAAAAGAGTTTAACTTTAAGAGTTTTGATGAATTGATTGTTAGTAATGAGATGGCACTAGTAGACGACACATTCAGATCATTGCCTGTACCTGTAATCTCTGACCACATAAAGATGATTAATGTACATGATATCACTGGAGAACTATTTTCAAACATGAAGACCCAACCTCTATCTGCATCTGATGGAATTTACTTAAACTGGGATCTACTGGAAGAAGATAAATGCAATTACGCTATATCTAATTGGTATCCGAACATATGGGCCAAGATAGATACGAAAAACCATGATTTCAGAGAAAAAACTTTTGACAACAGAAAAATGATCTTTGATTTAGTTTTCTTTGGTGATTCAATAGTTGAATGTGACCATAAAAATAGTGAAGACTTGCAGAATTTGCTTTCTGATAGAATTTCTCAGCTTGACAATCAGCCTGTAGAATTTGCTGTGAGCACACTTTTAGAACACGGATCTTCCAATAAAGGATGTCGAGAACAATTACTTGAAAAATATGCACAGATGAAATCTATATCAGATATCAGCAATCTTAGTGATACTACAGGTAAATGTGACCTTCAACAAAGTGAAGACTTGCAGAAGTTGCTTTCTGATAGCATTTCTCAGCCTGTAGAGTTTGCTTCTGGCAAAATATTAGAAAATGGGTCTTCTAATCAAGGACATCAAGAACAATTACCAGAAAGAAATGCAGAGAGGGCTTCATTATTATTTAAGTCTATGTCAGAAATCAGCAACCTTGCTTATTTCTTGAACCCTCAAAAAGCAACTGTTAAGGAGAGTTGTTATTTTGCAGTAGACTCCACCAATGCTAATGTTAATATTCCAAAATATACTTCCACTGCATTGAAACCTGGTTTACAATCACAAGGATGGCACACTGTTCTGCATAGAGTTAAACTGTCTGATAATATTGTGGCTCTTGCTAGTTATTTTGGAAAAAGCTATCTGGCCATTTTGCAGAGTGATACAGAGCTGACAAAGACGCATAAATCAGATGTTCATTATTTTGAATTGCTGAGTCTTCAAAAGCACAAACTGATTGAATTCCATGTAAATGGAAATAATATGGCGTTTATTGTGTTAAGTGCAATTAAACAGGCAGTTTGGTACTTATGTTTCTATGGTCTCAATCCAGCATGTTTGTATCTAGAAAAACTATGTCAAAACATGGTCTACTTGAAATCAAGATTAGGCACCCTCCAATCTTTGGTCAAAGATGAAAACAGGAAGATGGAAAACGATATTACTATGGCCCACTCATCGCTAACAATTGTCAAGGAAATTTTACTGGAAAACATCAAACAGGATAGCTTGAAAGCTTTAATTGTGGCTGAAGAAGTATTCTGGTGGACTTTGAAAAATCTCCTTCTCTCCCTGAGGTTATCATTTTGTGAACTAAATGACTCTGACAGAAATCAGCCATATGCAAATAATATGCCTGAGGAATCTGATACTAAAATGATGGAACTTCTGAGCTCAGACTGCTTGCTGGTTTCATACAAGCATGTTTCTCCATTATTTCCATTCAACAAATTTGGCATTATCTTGGAATATGGTGGTCCAAATTGTTTTTCTAGAATATCTGAATTTTCATCAAATTCAGTGGGATTGCCTAATCTTCATTTTTTGACGGTTGAATTGAATGACCATGCCGTTCTCAAAGCACTCTGTCAAGGTGTTGAAACACCCCCATACACTGAAATGTTGCCGGAAACTGAGACTCCTCTTCTTTTCAACCACAAGGAAAGTATGGTAAATAAAAAATTAGAGCGACTACTGAACTTTTATCCTACGGAACAAAACCATGATATAAAATCTTCAAAGGCTGCACTTGAAGAAGACACTTTTGTGCCTCTAATTCCTGCTGTGAAAATTGAGCATGACCATCAGAGCTTAGAGTCTTTTACTGGATCAGTTATCATTGTCAATACTCAAAATGCAGATAAGGAAATGATAGTGTCCAGAAGAAGCTCTTACCAAGTAATTCTTGCGTTGGAGAAAAGAGGAATTCAAGTTGCTGAACGTGATTTAGATTTACCAGTGGATATTATATTAAGTTCAGCAGTTTGCTTGGCATGGTATGATAGTACAAACCTTGTGAAGAAAGCAACTCCTGTGACTGAGGCATCTTCAAGCCTGCCTTCATGTATCGATAATATTGCAACTGATGTTCTACCATTGCTTAGTTTTTACTTCTGTGGATGCTTTCTGGTCTTTGAAGGGGAATCTAACTTTCTTTCAACTGTTATGGAGTACTCGGATGGACTTTATGCAGCAGCCACAAGCCTGGGAATGGATTTGCAGATCTTCTACTCTTACTCACCAGAGTTGACCAATGAAATTATGGTAAACTGCATTAAGAGTACTGCCATTCAGACAAGGGGTCTGTATTCTAAAATGCCTGATTCAGTAACTCTCGCAGAGTCCTTTCTTACGCAATTTCCTGGAATAAATCCTTTAACAGCACAGTCTATACTATCTTTAGGAGTCACACTCAATGAGTTTCTTGCATGGTCACACGACCAAAGGATACATGTTTTAGAAAAATATAATGTTCCAGAACAAAGTCTTTCTCTATTGAGCGTCTTCTGCAAATATGGGGAAAGGGAGGATTCAAAATCCGTAATGACAGACTGCTCTTCTTCGGTATCTTCTGGTCCAGATTCAGATAGGTGTCGGTTTTATCAATTTGACAATAAAAGACAAAGAACAAACCCTGTAGATCAGAGTGATGAACTATGTTTTGATGAGTTGCAATTTGAAACACCAAACCATGTAGTTGAGGCTGTCCCTGGTCCGTCTACCTTGCAAAATCCTTATGATCTTGGTATGTCAAAAGATGCTTGGAGATCTAGCGACTCGGGAAAAGCTAGTTTCCACACGAATGACCCATTTTACCAAAAGCAAAACAACATTGTGACAACAAAGAGAAACCACTCCAGAGTCTCTCCATCATCATGGAACTGTAAAGCTCCCGAAATATATGAGCAGCTAGAACAGCCCAGTTTTTCTTTGAAAAATAAAGGGTTGGCTCAAAATGAAATAATGGATAATGATTTGATGGGGAAAAATTTGAAATGGCACAACCTGGGTAAACTTGAGAAGCTGCACGAGGGCATCCGAGGTGAAGTGGTTGACTTGACTAATAGTCCTCTATTAGATGAAAGCTTCTCCATTTCTGACACCATGTATTTCCCAAATCAGATAGATGAGACAGAGAAAGATCATTTGAGAAAGAATAAAATTGTAAGGAAATTGTCATTTGGTAACAGCATTCACCCAGAAACCAACTCAATGTGGAGATCAATGAATGATACAGGACAGGTTTGTCACCATGCAGAACCAGATTTTGGAAAAGATGCATTTCCTCTTGATTTCAATCCCCGTGGAAACATTGATTCATCTCCGGTAAGAAACTTAGGAGGATTAACCTTCGAGGAGGGAATATCATATTTGAGCGAAACCCCACTCTCACGTGTCTGCAGGTCAGCTACTCCATTAAAGCATTCACCTTGGACAACTGAATTTATTAACAAAGTAAAAGAAAAGAGCAAATTGCGTCAAAAATCAGTATGGTATGGGAATTCCAGTTCTTATTTTGGGTATCAGGGGAATATTTCGAAAGCTTCTAAGAAGAGAAGTCCCTCTACACTTGATTCCTTTAGGTACCAACCTAGTAAAACACCTGGAAATATTCAGGAACAGAAAAGACAGAAGCAATCTGGACAATCTTCAAACTCAGCCAAGAAAGGAAGATATCCCGTTCCCATATCCACATGGACTCCAAATGACAAGAGATCGACAATGTTTATGGCAGGCACTAACATTTGGGAAGAGTGCAAGTGGAGCTCAAACTAA 4983 0.3887 MRTRYLNNDYFTLPPSHRHESTPFLHLPVPRLPTPLSSSVDHHLNFYSSLPDVSLHIDPFPIHSALSSFLSLVLPHKIAIPIPDPSSSVTDYPESNNSLLREADFIFEDRVSNADIEFSKESKTVTLSNESEVVYEPFQFETPEQMDTLLENVCFTKKERMQMLSHTPEAENSMEMFMSESLMQYPYEDLESVSRMEDVISEYLKGENACALEGNISVQLLPYSDKKTFLILEVDEESLGIPTSLSMVDIVESYFGNLRPQSFDEQYQFITEGRELLDSKVHDLVKLFSDDCVSKKSLILSDLFPERDFLNMLENEHVDGTLQADSDLLVNLITFQEFVFLDEDMINNTFEASYDTKASDDLEASDWMFKKEFNFKSFDELIVSNEMALVDDTFRSLPVPVISDHIKMINVHDITGELFSNMKTQPLSASDGIYLNWDLLEEDKCNYAISNWYPNIWAKIDTKNHDFREKTFDNRKMIFDLVFFGDSIVECDHKNSEDLQNLLSDRISQLDNQPVEFAVSTLLEHGSSNKGCREQLLEKYAQMKSISDISNLSDTTGKCDLQQSEDLQKLLSDSISQPVEFASGKILENGSSNQGHQEQLPERNAERASLLFKSMSEISNLAYFLNPQKATVKESCYFAVDSTNANVNIPKYTSTALKPGLQSQGWHTVLHRVKLSDNIVALASYFGKSYLAILQSDTELTKTHKSDVHYFELLSLQKHKLIEFHVNGNNMAFIVLSAIKQAVWYLCFYGLNPACLYLEKLCQNMVYLKSRLGTLQSLVKDENRKMENDITMAHSSLTIVKEILLENIKQDSLKALIVAEEVFWWTLKNLLLSLRLSFCELNDSDRNQPYANNMPEESDTKMMELLSSDCLLVSYKHVSPLFPFNKFGIILEYGGPNCFSRISEFSSNSVGLPNLHFLTVELNDHAVLKALCQGVETPPYTEMLPETETPLLFNHKESMVNKKLERLLNFYPTEQNHDIKSSKAALEEDTFVPLIPAVKIEHDHQSLESFTGSVIIVNTQNADKEMIVSRRSSYQVILALEKRGIQVAERDLDLPVDIILSSAVCLAWYDSTNLVKKATPVTEASSSLPSCIDNIATDVLPLLSFYFCGCFLVFEGESNFLSTVMEYSDGLYAAATSLGMDLQIFYSYSPELTNEIMVNCIKSTAIQTRGLYSKMPDSVTLAESFLTQFPGINPLTAQSILSLGVTLNEFLAWSHDQRIHVLEKYNVPEQSLSLLSVFCKYGEREDSKSVMTDCSSSVSSGPDSDRCRFYQFDNKRQRTNPVDQSDELCFDELQFETPNHVVEAVPGPSTLQNPYDLGMSKDAWRSSDSGKASFHTNDPFYQKQNNIVTTKRNHSRVSPSSWNCKAPEIYEQLEQPSFSLKNKGLAQNEIMDNDLMGKNLKWHNLGKLEKLHEGIRGEVVDLTNSPLLDESFSISDTMYFPNQIDETEKDHLRKNKIVRKLSFGNSIHPETNSMWRSMNDTGQVCHHAEPDFGKDAFPLDFNPRGNIDSSPVRNLGGLTFEEGISYLSETPLSRVCRSATPLKHSPWTTEFINKVKEKSKLRQKSVWYGNSSSYFGYQGNISKASKKRSPSTLDSFRYQPSKTPGNIQEQKRQKQSGQSSNSAKKGRYPVPISTWTPNDKRSTMFMAGTNIWEECKWSSN 1660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04301 1660 MobiDBLite consensus disorder prediction 1582 1641 - -
Vifa1g04301 1660 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 1 548 IPR038824 GO:0007131
Vifa1g04301 1660 MobiDBLite consensus disorder prediction 1582 1627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04301 Vifa-Chr1 667739397 667748376 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04301 - - gmx:102663374 1885.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04301 1 667739397 667748376 Vifa1g04301 1 667739397 667748376 ECH