Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04293 ATGGCTCTTCAACTCTGGTCAACCCTCAAGGAAGCCATTGCTGTCTACACTGGCCTCTCCCCAGCAACGTTCTTCACTGTCCTAGCAATTCTCTTCACCCTATACTACATCGTCACAAGCCTCTTCGGTTCCTCAGACACCCCTCAACGCCATGAACCCTCGAGAGACTTTGATGCTCAGATGGAGCCTCTTAAACCGCCTGTTCAGATCGGTGAAGTTACCGAGGAAGAGCTTAAGGATTATGATGGGAATAACCCGGATAAGCCTCTTCTTATGGCTATTAAGGGTCAGATCTATGATGTTTCACAAAGCAGGATGTTTTATGGCCCCGGTGGACCTTATGCCCTATTTGCTGGTAAGGATGCTAGCAGAGCTTTAGCGAAGATGTCTTTTGAAGAGAAAGATCTAACCGGGGACATATCTGGTCTTGGCCCATTTGAGCTCGAAGCCTTGCAAGATTGGGAATACAAGTTTATGGGAAAGTACGTAAAGGTTGGAACTATCAAACAAACAGTTCCCATAACCGAACCAGAAGCCGCTGGTGAACCTTCAGAGTCTGCTTCTCCTGATGCCGACACTTCCATTCCTCGTGAAAACAATGATGCTGCTGAAGCTGAAGCTTCTAAGCATCATGAAGACGCACCTTCAGAAACTCCAGCTGTTGTTAAAAGTGATGAAAATGCACCTTCACATGTTGATGCAGATCATAAGGGGTAA 717 0.4658 MALQLWSTLKEAIAVYTGLSPATFFTVLAILFTLYYIVTSLFGSSDTPQRHEPSRDFDAQMEPLKPPVQIGEVTEEELKDYDGNNPDKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMGKYVKVGTIKQTVPITEPEAAGEPSESASPDADTSIPRENNDAAEAEASKHHEDAPSETPAVVKSDENAPSHVDADHKG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04293 238 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 66 169 IPR036400 -
Vifa1g04293 238 SMART Cyt_b5_2 73 169 IPR001199 -
Vifa1g04293 238 MobiDBLite consensus disorder prediction 197 219 - -
Vifa1g04293 238 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 21 186 - -
Vifa1g04293 238 MobiDBLite consensus disorder prediction 174 238 - -
Vifa1g04293 238 Gene3D - 71 169 IPR036400 -
Vifa1g04293 238 FunFam Membrane steroid-binding protein 1 71 169 - -
Vifa1g04293 238 Pfam Cytochrome b5-like Heme/Steroid binding domain 74 167 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04293 Vifa-Chr1 666102566 666104696 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04293 K17278 - gmx:100807452 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04293 1 666102566 666104696 Vifa1g04293 1 666102566 666104696 ECH
Vifa1g04293 1 666102566 666104696 Vifa3g02946 3 827921552 827922448 PCT