Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04287 ATGGAGGTTTCTGATCCGAATGCATGTTTGCCACCAGGTTGGACTGTGAAAGTAAATGTGAGAAAGAATGGTAAGATAGACAAGTTTTACTTTCCCCCTTCAAGTGATCGGAAATTTAATTCCCTAGTAGGCGTATTTCGTTATCTAAACGATGCTAAGAACAAAGCCAGCATCCAAAGAGTCTCAAGCATAGAAAGTCATCAACAGATTCCTCGACGTGCATCAAAGCGTCTTGCTGGAATTAAGGCCGATCCACTTCTAGAACTTAAACCAACTCGAGCACGTCGAGACATAGTGAAACAATCAGATAGATCCACCAATAGCGTGCTGAGTGATCAACCGAAACCGTTGAATACCGTTGGAGGATCAGAAATCATGTTCAATGTCCAAAGTACTGAAAACACATTGAAGAACAATTCTACTGACAGAGAGTGTGTGAAAGTCATCGAGAACAAACATAATATTGATGTGAAGTTAGATTACACTGATGAATTTCCCCTCGACAAAATACTAACCGATCCATGTATCGCATTTGCGATACAAACTCTAACCGGTATCACATTCGAGACTCTTAAAGACGCTCAAACTTCTGCTTCAGCTGAAGAGCGCGGTAAGAAAATCAATGTCACAAACGATGATCCGAAAAAATTTGCTGTTGCTGAAATTGACAAGGCAGGACCATGTTCTGAAAAGAAACATGATATCTCAAAGAAGGCATTGTCAGGTGTGAACTTATGCAAAAGTGATTACAATTGCAGTCAAATCTTTGGTAAAAAAAGCAGGAATGTTTGTTAG 795 0.3987 MEVSDPNACLPPGWTVKVNVRKNGKIDKFYFPPSSDRKFNSLVGVFRYLNDAKNKASIQRVSSIESHQQIPRRASKRLAGIKADPLLELKPTRARRDIVKQSDRSTNSVLSDQPKPLNTVGGSEIMFNVQSTENTLKNNSTDRECVKVIENKHNIDVKLDYTDEFPLDKILTDPCIAFAIQTLTGITFETLKDAQTSASAEERGKKINVTNDDPKKFAVAEIDKAGPCSEKKHDISKKALSGVNLCKSDYNCSQIFGKKSRNVC 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04287 264 Pfam Methyl-CpG binding domain 9 59 IPR001739 GO:0003677
Vifa1g04287 264 Gene3D - 2 108 - -
Vifa1g04287 264 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 69 IPR001739 GO:0003677
Vifa1g04287 264 PANTHER OS04G0193200 PROTEIN 57 207 IPR038945 -
Vifa1g04287 264 SUPERFAMILY DNA-binding domain 8 54 IPR016177 GO:0003677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04287 - - psat:127129542 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04287 1 665247981 665249426 Vifa1g04287 1 665247981 665249426 ECH