Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04275 ATGTCTAGGCAATTAGAACCACTTACTGTGGGAGGAGTGATAGGAGAAGTTGTTGACATTTTTAATCCAAGTGTAAAAATGAATGTGACATATTCAACCAAGCAAGTTGCAAATGGTCATGAGTTAATGCCTTCTATTGTTATCAACAAACCTAGGGTTGATATTGGTGGTGATGACATGAGGTCTGCTTATACTTTGATCATGACAGACCCAGATGCTCCTAGTCCTAGTGATCCATATTTAAGGGAACATCTTCACTGGATGGTTACAGATATTCCAGGCACCACAGATGTCTCTTTTGGAAAGGAGATTGTTGAGTATGAGAATCCAAAGCCGGTGATAGGAATCCATAGATATGTCTTCGTCTTGTTCAAGCAAAGAGGGAGACAAACAGTGAGAGCTCCGAATTCTAGAGACCAGTTCAGCACAAGGAGATTCTCTCAGGAGAATAGCCTTGGCCTACCGGTTGCTGCAGTTTACTTTAATGCTCAAAGAGAAACTGCAGCAAGAAGAAGAAGATGA 522 0.4138 MSRQLEPLTVGGVIGEVVDIFNPSVKMNVTYSTKQVANGHELMPSIVINKPRVDIGGDDMRSAYTLIMTDPDAPSPSDPYLREHLHWMVTDIPGTTDVSFGKEIVEYENPKPVIGIHRYVFVLFKQRGRQTVRAPNSRDQFSTRRFSQENSLGLPVAAVYFNAQRETAARRRR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04275 173 Gene3D - 2 172 IPR036610 -
Vifa1g04275 173 SUPERFAMILY PEBP-like 12 166 IPR036610 -
Vifa1g04275 173 Pfam Phosphatidylethanolamine-binding protein 42 161 IPR008914 -
Vifa1g04275 173 CDD PEBP_euk 25 163 IPR035810 -
Vifa1g04275 173 FunFam Terminal flower 1 1 172 - -
Vifa1g04275 173 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 64 86 IPR001858 -
Vifa1g04275 173 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 11 167 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04275 Vifa-Chr1 661451891 661453029 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04275 K06910 - gmx:100174966 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04275 1 661451891 661453029 Vifa1g04275 1 661451891 661453029 ECH