Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04261 ATGGCGTCCTCTGATCCCAACAAGCTGTTAACCAAAGCTGATAAACTAACAAAACTCAGTCTCACTAGGTGGAGTGCTGATTGGAAGACTGCTACTGGTCTTTATGAGCAGGCTGCTATTGGGTTTAGAGCTTCCAAGAATCATGAGAAAGCAAAGTTGGCTTATGAGAAAGCTTCACAAGGACAAGAGATGCTTTCTTCACCTTGGGATGCAGCTAAGCACATGGAATCTGCTGCTGCTCTGGCCAAGGAATTGAGCAACTGGAGAGAAGTTGGGGACTTCTATCAAAAGGCATCTCAATTGTACATGGAGTGCAGTAGACCACAACCTGCATCAGATGCTCTTGCAAAGGGAGCTCGTGCTTTAGAAGATACCATGCCTGAAGAAGCGATTCAGTTATATACAGATGCTTGTACAATTCTTGAAGACGATGATAAGGATCAGATGGCCTTCGATCTATACCGTGCTGTAACCAGTGTTTATATAAAACTTGAGAAATATTCAGATGCCGCATCTTCCCTGTTGAGATTGGGCTTGGCAGCTGACAAATGTAATGCTACAAATAGTCAGTCCAAGGTTTGGAATAACATATAA 594 0.4327 MASSDPNKLLTKADKLTKLSLTRWSADWKTATGLYEQAAIGFRASKNHEKAKLAYEKASQGQEMLSSPWDAAKHMESAAALAKELSNWREVGDFYQKASQLYMECSRPQPASDALAKGARALEDTMPEEAIQLYTDACTILEDDDKDQMAFDLYRAVTSVYIKLEKYSDAASSLLRLGLAADKCNATNSQSKVWNNI 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04261 197 Pfam Soluble NSF attachment protein, SNAP 5 173 - -
Vifa1g04261 197 SUPERFAMILY TPR-like 6 186 IPR011990 GO:0005515
Vifa1g04261 197 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 190 IPR000744 GO:0006886
Vifa1g04261 197 Gene3D Tetratricopeptide repeat domain 3 195 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04261 Vifa-Chr1 659242783 659245219 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04261 K21198 - qsu:111985801 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04261 1 659242783 659245219 Vifa1g04261 1 659242783 659245219 ECH