Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04249 ATGAATTTGAACATCTTCAAGAAGAAAACCTCACCCAAAGAAGCTCTAAGGCAAAGTAAGAGAGAAATGTCTGTTGCGACTAGAGGAATTGAAAGAGAGATAGGGTCGCTTCAGATGGAGGAAAAGAAGTTGGTGGCAGAGATTAAAAGAGAAGCAAAAACTGGAAATGAGGCTGCTACAAGAATCCTGGCTCGTCAACTTGTTAGGTTACGCCAACAGATAACCAATTTGCAGGGAAGTCGTGCTCAGATCAGGGGTGTAGCAACTCACACACAGGCATTATATGCAAGCACATCAATCTCTACAGGGATGAAGGGTGCAACTAAAGCAATGGTAGCAATGAATAAGCAAATGGCACCAGCAAAGCAGGCTAAAGTGATTCAAGAATTCCAAAAACAATCAGCTCAAATGGACATGACGATTGAGATGATGTCAGAATCTATTGATGAAACTTTAGACAAAGATGAAGCAGAGGAAGAGTCGGAAGAGCTCACTAACCAGGTTCTTGATGAAATTGGAGTGGATATTGCATCCCAGTTATCTTCTGCTCCGAAAGGTCGGATTGCTTCAAGGAATACTGAAAATGTTGCTGCAAGATCAGAATCCCAAGATGTTGAAGAACTTGAAAAGAGATTAGCTTCTCTCCGAAGAATATAA 657 0.414 MNLNIFKKKTSPKEALRQSKREMSVATRGIEREIGSLQMEEKKLVAEIKREAKTGNEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQAKVIQEFQKQSAQMDMTIEMMSESIDETLDKDEAEEESEELTNQVLDEIGVDIASQLSSAPKGRIASRNTENVAARSESQDVEELEKRLASLRRI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04249 218 Gene3D - 6 183 - -
Vifa1g04249 218 MobiDBLite consensus disorder prediction 182 207 - -
Vifa1g04249 218 Coils Coil 147 167 - -
Vifa1g04249 218 Pfam Snf7 19 187 IPR005024 GO:0007034
Vifa1g04249 218 Coils Coil 198 218 - -
Vifa1g04249 218 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 5 216 IPR005024 GO:0007034
Vifa1g04249 218 MobiDBLite consensus disorder prediction 1 23 - -
Vifa1g04249 218 MobiDBLite consensus disorder prediction 183 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04249 Vifa-Chr1 657022428 657027209 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04249 K12191 - gmx:100777179 367.851