Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04245 ATGGATTCCCCACCCTCCCAACAAACGTGGGGAAGGTCACCAACCCTCTCCTCAACCTCTTCCACATCCTTCTCCAAAGACGCAATCCAAAGCCTCTCTTCCATCCTCAACAACCCTCTCTCCTCCACCACAATCTCCCCTCCCGAATTCACCCCTATCTCCTCCACCAAATCCACCTCCGAAATCACCCGATCCGATTTCCACACCTACCTCACAACCGTCTCCGATCCCTTCCACCGCTTCGACGACATCCGCAAACACGCAATCAAAGAGATCTCCCTCCCAACCGACCTCGACGGCGCCGGCGAAGCCCTCGTCGCTTGTCTCCGCGAGGTTCCCTCTCTTTACTTCAAAGAAGATTTCCGTCTCGAAGAAGGCGCCACGTTCCGCGCTGCGTGTCCGTTCTCGACGTTCTCCGAAAACGCTGTGCTGCAGGAGAAGCTCTCGCAGTATCTTGATGTGGTGGAGCTTCATCTTGTTAAGGAGATCTCGCTGAGGTCGTCTTCGTTCTTCGAAGCGCAGGGACAGTTGCAAGATCTTAATGGTAAGATCGTTGAAGGATGTGCGAGGATTCGGGAATTGAAGGATACTGTTCGGCTTATTGATTCAGATTTGGTTGAGTCTGCTAGGCAGATTCAGCAGCTTAATGGCACCAGGACGAATCTGTTGGCGCTTCAGCAGAAACTTAGACTCATATTCTATGTTAATCAAGCACTCTCAGCTCTCAAATTGCTTGTTGCATCTGCAGATTGTGCTGGAGCACTGGATGTAACTGACGATTTGCAACATTTACTGGATGGAGATGAGCTCACCGGCTTGCACTGCTTTCGTCATCTTAGAGATCATGTGACAGGTTTTATAGAATCCATAAACAGCATTCTCTCAGCAGAGTTTGTTCGAGCTTCTTTACACGATGCTGCAGAATCAGATGCGATAATTTTATCTAAAGCTAAAGCAAGAGCTTCCCTTCCCATGAATGGAAAAGATGATGAAGTAAAGTTAGAAGAAGAAGAGACAACTAATTTCAAAGACAGTCTTCTCCCTACTGTAATTGGCTTGCTTAGAACAGCTAAACTTCCCTCTATTCTGAGGATCTATCGAGACACACTGACTGCTGATATGAAGAGTGCTATTAAAACCGCTGTTGCCGAGTTGCTTCCAGTTCTTGCTGTCCGAGGTTCAGAATCAGAGTTCTTTTCTGGAGACAGAGCTGTAGAGGCAGATGGTGGTGGTGCTTCGCTTGCTAGCAAGTTAAGGAGTCTGTCATCTGATTGCTTTGTCCATCTTTTGAGTGCTATTTTCATGATAGTACAGGCACATTTAGTACGGGCTGCTGAAGTGAAAAAAGCCATTGAATGGATTTTGAGCAACTGTGATGGTCATTATGCTTCTGATTCAGTTGCTGCCGCAATTGCTCATGGTGCTGCAGCTGCTGAAATATCCCAAGAAAGCGATGTTCATGGTAATACATTTTTTCCGTATTCACCGCAGAGAAATGTTGCCAAGGGTCCCTCTTTTCAGGGAAAAACAATTGATGCTGTGAGCTCCTCAAACATGTCAAAAAATTTCAGAGCTGATGTATTGCGAGAAAACGCAGAAGCTGTCTTTGCAGCATGTGATGCTGCTCATGGAAGATGGGCAAAGCTTCTGGGGGTCCGTGCTGTTCTCCATCCTAGATTGAAACTGCAGGAGTTTCTAACTATTTACAACATCACCCATGAGTTCATTACAGCTACTGAAAAGATTGGTGGAAGATTGGGATACAGCATCCGTGGGACACTGCAGTCACAGGCCAAGGCTTTTATTGATTTTCAGCATGATTCTCGGATGTCAAAAATCAAGGCAGTGCTTGACCAAGAAACTTGGGTGGAGATAGATGTTCCTGATGAATTTCAATCCATTATCAATATGCTTTTCTCATCGGATGTGCTGTCTTCTGAGAACCTTAATGGTGTTGAAGAGGATAATTCATCGGGTTACCATGATATGGCAACTAACAATGATGCCCGGCCGATGGCAGACACTGGACTGTCAAGTGCCGAACAGCATGTTGAGCAGGCTGATTCCACGGAAGAATCTAAGAAATCACATAGAGGTCATAGCAAATTGGTAGGGAGTATCAGCACTGAGAAAGATCATAAAAAATCTGCATCTCAGGCTCTTTTCTACAAATGTGTTGGTTATCACATGGTTAACTGTGGCTTGATATTGCTGAAGATGTTGTCAGAATACATTGATATGAACAACCTTTTGCCAACATTATCTTCAGAAGTTGTTCACCGTGTTGCAGAAATCTTGAAGTTTTTCAACACAAGAACATGCCAACTTGTGTTAGGTGCTGGTGCAATGCAGGTGTCTGGTTTGAAGTCCATCACCTCTAAACACCTGGCGCTAGCAAGTCAAGTCATTAGTTTTATACATGCTATTATTCCTGAAATTCGGCAGATTCTTTTTCTGAAAGTACCTGAGACTAGAAAATTGCTATTGCTTTCAGAGATTGATCGAGTCGCTCAGGATTATAAAGTCCATAGAGATGAAATACATACCAAATTGGTTCAGATAATGCGAGAAAGATTATTAGTCCACTTGCGTGGGTTGCCTCAAATTGTTGAGGGTTGGAATAGACCCGAGGATGCTGATCCCCAGCCTAGTCAATTTGCTCGGTCCCTTACAAAGGAAGTTGGATACCTCCAGCGTGTTCTATCTCGGACCTTGAATGAAGAAGATGTTCAGGCAATTTTCAGGCAAGTGGTCGTTATCTTTCATTCACAAATTTCAGAAGCATTTTCAAGATTTGATATAAGCACTTCACAAGCACAGAATAGGTTATATCGGGACATCAAACATATTCTCCAATGCATACGGTCATTACCATCGGGTGATTTAAGTAAATCTGATACCCCTAACTGGGGTCAGCTGGATGAATTCTTGGTGCAAAGATTTGGGAATGATGCTGTTCAGTAA 2964 0.4453 MDSPPSQQTWGRSPTLSSTSSTSFSKDAIQSLSSILNNPLSSTTISPPEFTPISSTKSTSEITRSDFHTYLTTVSDPFHRFDDIRKHAIKEISLPTDLDGAGEALVACLREVPSLYFKEDFRLEEGATFRAACPFSTFSENAVLQEKLSQYLDVVELHLVKEISLRSSSFFEAQGQLQDLNGKIVEGCARIRELKDTVRLIDSDLVESARQIQQLNGTRTNLLALQQKLRLIFYVNQALSALKLLVASADCAGALDVTDDLQHLLDGDELTGLHCFRHLRDHVTGFIESINSILSAEFVRASLHDAAESDAIILSKAKARASLPMNGKDDEVKLEEEETTNFKDSLLPTVIGLLRTAKLPSILRIYRDTLTADMKSAIKTAVAELLPVLAVRGSESEFFSGDRAVEADGGGASLASKLRSLSSDCFVHLLSAIFMIVQAHLVRAAEVKKAIEWILSNCDGHYASDSVAAAIAHGAAAAEISQESDVHGNTFFPYSPQRNVAKGPSFQGKTIDAVSSSNMSKNFRADVLRENAEAVFAACDAAHGRWAKLLGVRAVLHPRLKLQEFLTIYNITHEFITATEKIGGRLGYSIRGTLQSQAKAFIDFQHDSRMSKIKAVLDQETWVEIDVPDEFQSIINMLFSSDVLSSENLNGVEEDNSSGYHDMATNNDARPMADTGLSSAEQHVEQADSTEESKKSHRGHSKLVGSISTEKDHKKSASQALFYKCVGYHMVNCGLILLKMLSEYIDMNNLLPTLSSEVVHRVAEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFIHAIIPEIRQILFLKVPETRKLLLLSEIDRVAQDYKVHRDEIHTKLVQIMRERLLVHLRGLPQIVEGWNRPEDADPQPSQFARSLTKEVGYLQRVLSRTLNEEDVQAIFRQVVVIFHSQISEAFSRFDISTSQAQNRLYRDIKHILQCIRSLPSGDLSKSDTPNWGQLDEFLVQRFGNDAVQ 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04245 987 Gene3D - 826 865 - -
Vifa1g04245 987 PANTHER VACUOLAR PROTEIN SORTING 54 20 950 IPR039745 GO:0000938|GO:0042147
Vifa1g04245 987 MobiDBLite consensus disorder prediction 685 710 - -
Vifa1g04245 987 Pfam Vps54-like protein 728 858 IPR012501 GO:0042147
Vifa1g04245 987 MobiDBLite consensus disorder prediction 1 22 - -
Vifa1g04245 987 MobiDBLite consensus disorder prediction 650 664 - -
Vifa1g04245 987 MobiDBLite consensus disorder prediction 650 710 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04245 K17600 - gmx:100804432 1555.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04245 1 656246504 656262734 Vifa1g04245 1 656246504 656262734 ECH