Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04232 ATGGGGTGTGTGTTATCAAGTATTGATGAGGATGGAAGAGTTGGCATATGCAAGGAAAGGAAGAAGGTAATCAAACAGCTAGTGTGTAAAAGAGAGGAGTTTTCTGATTCCCTGCTAGCTTATTTGAAAGCATTGAGGAACACCGGCGCCACTCTCAGGCAGTTCACCGAGTCCGATATATTAGAATTGGACTTTGCATCTACTGGCCTGCCTGACCCCCCACCTTCCCCGCCGCCTAATTTGCTACTTCCACCACCGGTGCCTCCTTTTCTCACCGACAAGAGTATGCTGCAAGTTGGCCAAGATGAAATGCTAGAGAATGATGACATTGATCCAATTATGAACTCGCTGTTGCTGTTTCGACCTATGGATAAAATAGAAGTGGTAGAGTCCTTGGAGGAGGAGAATTGGGAAGAAACCAAAACGGAATTTGAAGATGAAGTCCAAGACTCGGAAGGTGATGCGAGTGTTAGAAAATTACGCAGTGGAAAGCAACAGGTTAGAGAACCAGTTGATGATAATCCATCTGCCATTTGTTTGTTTAAGAAAGAAACTCACGTTCCGAAAGCTACGCCCAAGGGAGTTGGTAGAAATGTGAAAACTTTGGAGGGTATAGTTAAAGAGTTAGATGATCATTTCCTGAAAGCATCAGCATGCATAAAGGAAATTGCTGTCCTCATTGATATCAGCAGTGGAGATACTCTTCTGCGGCAGAATTCTGGCCGTCATCTTAGCAAGAGAACCAATTCTGCTAGGGTGTTTAGTGTACTGTCATGGAGTAGGTATACTAAGTCGCAAACATTCACCAAAGGTGACGCCGACTTTTCTAGTCCTAGTGAACCATGCAGGCCTGGAGCTCATTGTGCCACGCTTAAAAAACTATATGCCGCTGAGAAGAAACTTTACGAAGCAGTAAAGGAGGAGGGAATTACCAAATTGGAGTTTGAGAGGAAGTCCGCCTCATTGCAAAAACAAGAGGATGAGAATCTTGACTCAGCCAAAATCGCCAAAATTCGATCAAATGTTGAGAAGTTGGAGTCTGATTTAATAAGCCTACGGCAGTGCATCAGTGAAACATCATCATCAATTTTGGAACTTATAGATGAAGAGCTCTTACCACAATTAGTTGCATTAACAGCCGGGTTGTCACAAATGTGGAGGATAATGCATGAGTGCCATCAGTCTCAGGCTCTGATCTCTCAGCAGTTGATTAACCTAAGTGATAACCATAACACAATTCTAAGTTCTGAATATCACTACCAGGCTACAATTCAGTTCGAGAGTGAGGCCTCTTATTGGTATAATAGCTTCTGCAAACTTGTAAAATCGCAACGAGAGTACGTAGGGACCCTCAGTAAGTGGATCAAGCTTACGAACTGCCTCAGGGATGGTCATGAAAGCGGCGATCACTCTTCTATTCGCACCATTTGTGAACAATGGGAGCTTGGCCTTGATGGATTACCTGATAAGGAGGTCGCGGAAGCAATAAAAAACCTTTTGATGTCTATCCGTTCTATAATTGCGCAACAGGCCGAGGAAGATAACATTCTGAAAAAGTTGGAAAAACTTGAAAGAAAGTTGCAGAGGTGCTCGGCATCCATGGCTGTAATACAGAAAAAAATGGAATGGAATTTCGAAGAAGATGATGGAGATGTAGCCAATATAAGCCCGAAACATCCACTATTTCAGAAAAAAGCTGAAACAGAAGCCTTGAAGAAGCAAGTGGAAAGTGTGAAAGAAGATTATTTGGATTCTGTTCAATGTAGTAGGACCATGACCCTAGATAGCCTCCGAACTCGACTTCCCCATCTCTTCTTGTCACTGATGGAATTTTCAAGTGCTTCCTCTCAAACAATTGAGGCTATAAATTCTCAGTCAAGTCAATAG 1887 0.4287 MGCVLSSIDEDGRVGICKERKKVIKQLVCKREEFSDSLLAYLKALRNTGATLRQFTESDILELDFASTGLPDPPPSPPPNLLLPPPVPPFLTDKSMLQVGQDEMLENDDIDPIMNSLLLFRPMDKIEVVESLEEENWEETKTEFEDEVQDSEGDASVRKLRSGKQQVREPVDDNPSAICLFKKETHVPKATPKGVGRNVKTLEGIVKELDDHFLKASACIKEIAVLIDISSGDTLLRQNSGRHLSKRTNSARVFSVLSWSRYTKSQTFTKGDADFSSPSEPCRPGAHCATLKKLYAAEKKLYEAVKEEGITKLEFERKSASLQKQEDENLDSAKIAKIRSNVEKLESDLISLRQCISETSSSILELIDEELLPQLVALTAGLSQMWRIMHECHQSQALISQQLINLSDNHNTILSSEYHYQATIQFESEASYWYNSFCKLVKSQREYVGTLSKWIKLTNCLRDGHESGDHSSIRTICEQWELGLDGLPDKEVAEAIKNLLMSIRSIIAQQAEEDNILKKLEKLERKLQRCSASMAVIQKKMEWNFEEDDGDVANISPKHPLFQKKAETEALKKQVESVKEDYLDSVQCSRTMTLDSLRTRLPHLFLSLMEFSSASSQTIEAINSQSSQ 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04232 628 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Vifa1g04232 628 Coils Coil 506 540 - -
Vifa1g04232 628 Coils Coil 134 154 - -
Vifa1g04232 628 PANTHER UNCHARACTERIZED 1 624 - -
Vifa1g04232 628 Pfam Protein of unknown function (DUF632) 203 504 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04232 Vifa-Chr1 653882741 653885171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04232 1 60 Acyl Lipid Metabolism Gene Families AT2G27090 36.667 1.72e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04232 - - gmx:100809759 743.421